Basic Information
Gene ID
gene-GBA52_018880
Position
CM035465.1:5088413-5090696 (-)
2283bp
Gene Type
gene
Gene Description (Protein Product)
Aminotransferase class-V
Organism
Also AS MD12G1200200AT5G26600PRUPE_6G305300

Gene Structure

upstream:

Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
gene-GBA52_024399 Cystathionine beta-lyase
gene-GBA52_022289 Leucine aminopeptidase
gene-GBA52_026225 1-aminocyclopropane-1-carboxylate deaminase
Regulatory gene
gene-GBA52_001870 dof zinc finger protein
gene-GBA52_002902 Cyclic dof factor
gene-GBA52_005915 Dof zinc finger protein DOF4.6-like

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
KEGG Term Name Description
map01100 Metabolic pathways -
map00270 Cysteine and methionine metabolism Cysteine and methionine are sulfur-containing amino acids. Cysteine is synthesized from serine through different pathways in different organism groups. In bacteria and plants, cysteine is converted from serine (via acetylserine) by transfer of hydrogen sulfide [MD:M00021]. In animals, methionine-derived homocysteine is used as sulfur source and its condensation product with serine (cystathionine) is converted to cysteine [MD:M00338]. Cysteine is metabolized to pyruvate in multiple routes. Methionine is an essential amino acid, which animals cannot synthesize. In bacteria and plants, methionine is synthesized from aspartate [MD:M00017]. S-Adenosylmethionine (SAM), synthesized from methionine and ATP, is a methyl group donor in many important transfer reactions including DNA methylation for regulation of gene expression. SAM may also be used to regenerate methionine in the methionine salvage pathway [MD:M00034].