PPGR - Gene Detail

Basic Information

Gene Structure

Domain

Regulation&
Interaction

Annotation

Orthologus Group

Expresssion

Pathway

Basic Information

Gene ID	gene-GBA52_019019 View in Genome Browser
Position	CM035465.1:5941538-5944000 (-) 2462bp
Gene Type	gene
Gene Description (Protein Product)	Saposin (B) Domains
Organism	Prunus armeniaca
Also AS	MD12G1184900AT3G51730PRUPE_6G290000

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Domain

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Regulation&Interaction

Protein-protein interaction (PPI)	gene-GBA52_024699 Belongs to the peptidase A1 family gene-GBA52_024674 Belongs to the peptidase A1 family gene-GBA52_025299 Belongs to the peptidase A1 family
Regulatory gene	gene-GBA52_001870 dof zinc finger protein gene-GBA52_002902 Cyclic dof factor gene-GBA52_002966 ethylene-responsive transcription factor

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Annotation

Orthologous Group

Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

Expression Profile

DataSet	Number of Samples expressed(TPM>1)	Mean	Min	Max	Standard deviation(SD)	Coeffcient variation(CV)

Select Expression

Pathway

GO Term	Description	GO Category
GO:0000003	reproduction	BP
GO:0000323	lytic vacuole	CC
GO:0001655	urogenital system development	BP
GO:0001664	G protein-coupled receptor binding	MF
GO:0001775	cell activation	BP
GO:0002252	immune effector process	BP
GO:0002263	cell activation involved in immune response	BP
GO:0002274	myeloid leukocyte activation	BP
GO:0002275	myeloid cell activation involved in immune response	BP
GO:0002283	neutrophil activation involved in immune response	BP
GO:0002366	leukocyte activation involved in immune response	BP
GO:0002376	immune system process	BP
GO:0002443	leukocyte mediated immunity	BP
GO:0002444	myeloid leukocyte mediated immunity	BP
GO:0002446	neutrophil mediated immunity	BP
GO:0002576	platelet degranulation	BP
GO:0003006	developmental process involved in reproduction	BP
GO:0003674	molecular_function	MF
GO:0003824	catalytic activity	MF
GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	MF
GO:0004565	beta-galactosidase activity	MF
GO:0005102	signaling receptor binding	MF
GO:0005488	binding	MF
GO:0005515	protein binding	MF
GO:0005543	phospholipid binding	MF
GO:0005575	cellular_component	CC
GO:0005576	extracellular region	CC
GO:0005615	extracellular space	CC
GO:0005622	intracellular anatomical structure	CC
GO:0005623	obsolete cell	CC
GO:0005737	cytoplasm	CC
GO:0005764	lysosome	CC
GO:0005765	lysosomal membrane	CC
GO:0005766	primary lysosome	CC
GO:0005773	vacuole	CC
GO:0005774	vacuolar membrane	CC
GO:0005775	vacuolar lumen	CC
GO:0005886	plasma membrane	CC
GO:0006629	lipid metabolic process	BP
GO:0006643	membrane lipid metabolic process	BP
GO:0006664	glycolipid metabolic process	BP
GO:0006665	sphingolipid metabolic process	BP
GO:0006687	glycosphingolipid metabolic process	BP
GO:0006807	nitrogen compound metabolic process	BP
GO:0006810	transport	BP
GO:0006811	monoatomic ion transport	BP
GO:0006820	monoatomic anion transport	BP
GO:0006869	lipid transport	BP
GO:0006887	exocytosis	BP
GO:0006955	immune response	BP
GO:0007154	cell communication	BP
GO:0007165	signal transduction	BP
GO:0007186	G protein-coupled receptor signaling pathway	BP
GO:0007187	G protein-coupled receptor signaling pathway, coupled to cyclic nucleotide second messenger	BP
GO:0007188	adenylate cyclase-modulating G protein-coupled receptor signaling pathway	BP
GO:0007193	adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway	BP
GO:0007275	multicellular organism development	BP
GO:0008047	enzyme activator activity	MF
GO:0008150	biological_process	BP
GO:0008152	metabolic process	BP
GO:0008289	lipid binding	MF
GO:0009888	tissue development	BP
GO:0009894	regulation of catabolic process	BP
GO:0009987	cellular process	BP
GO:0010506	regulation of autophagy	BP
GO:0010876	lipid localization	BP
GO:0012505	endomembrane system	CC
GO:0012506	vesicle membrane	CC
GO:0015711	organic anion transport	BP
GO:0015849	organic acid transport	BP
GO:0015925	galactosidase activity	MF
GO:0016020	membrane	CC
GO:0016192	vesicle-mediated transport	BP
GO:0016787	hydrolase activity	MF
GO:0016798	hydrolase activity, acting on glycosyl bonds	MF
GO:0019216	regulation of lipid metabolic process	BP
GO:0019222	regulation of metabolic process	BP
GO:0022414	reproductive process	BP
GO:0023052	signaling	BP
GO:0030141	secretory granule	CC
GO:0030154	cell differentiation	BP
GO:0030234	enzyme regulator activity	MF
GO:0030659	cytoplasmic vesicle membrane	CC
GO:0030667	secretory granule membrane	CC
GO:0030850	prostate gland development	BP
GO:0030855	epithelial cell differentiation	BP
GO:0031090	organelle membrane	CC
GO:0031323	regulation of cellular metabolic process	BP
GO:0031329	regulation of cellular catabolic process	BP
GO:0031406	carboxylic acid binding	MF
GO:0031410	cytoplasmic vesicle	CC
GO:0031974	membrane-enclosed lumen	CC
GO:0031982	vesicle	CC
GO:0032501	multicellular organismal process	BP
GO:0032502	developmental process	BP
GO:0032940	secretion by cell	BP
GO:0033036	macromolecule localization	BP
GO:0033218	amide binding	MF
GO:0033293	monocarboxylic acid binding	MF
GO:0035265	organ growth	BP
GO:0035577	azurophil granule membrane	CC
GO:0035594	ganglioside binding	MF
GO:0035627	ceramide transport	BP
GO:0036094	small molecule binding	MF
GO:0036230	granulocyte activation	BP
GO:0040007	growth	BP
GO:0042119	neutrophil activation	BP
GO:0042582	azurophil granule	CC
GO:0042802	identical protein binding	MF
GO:0042803	protein homodimerization activity	MF
GO:0042886	amide transport	BP
GO:0043085	positive regulation of catalytic activity	BP
GO:0043167	ion binding	MF
GO:0043168	anion binding	MF
GO:0043177	organic acid binding	MF
GO:0043202	lysosomal lumen	CC
GO:0043208	glycosphingolipid binding	MF
GO:0043226	organelle	CC
GO:0043227	membrane-bounded organelle	CC
GO:0043229	intracellular organelle	CC
GO:0043231	intracellular membrane-bounded organelle	CC
GO:0043233	organelle lumen	CC
GO:0043299	leukocyte degranulation	BP
GO:0043312	neutrophil degranulation	BP
GO:0044093	positive regulation of molecular function	BP
GO:0044237	cellular metabolic process	BP
GO:0044238	primary metabolic process	BP
GO:0044255	cellular lipid metabolic process	BP
GO:0044421	obsolete extracellular region part	CC
GO:0044422	obsolete organelle part	CC
GO:0044424	obsolete intracellular part	CC
GO:0044433	obsolete cytoplasmic vesicle part	CC
GO:0044437	obsolete vacuolar part	CC
GO:0044444	obsolete cytoplasmic part	CC
GO:0044446	obsolete intracellular organelle part	CC
GO:0044464	obsolete cell part	CC
GO:0045055	regulated exocytosis	BP
GO:0045321	leukocyte activation	BP
GO:0046625	sphingolipid binding	MF
GO:0046836	glycolipid transport	BP
GO:0046903	secretion	BP
GO:0046942	carboxylic acid transport	BP
GO:0046983	protein dimerization activity	MF
GO:0048513	animal organ development	BP
GO:0048589	developmental growth	BP
GO:0048608	reproductive structure development	BP
GO:0048731	system development	BP
GO:0048732	gland development	BP
GO:0048856	anatomical structure development	BP
GO:0048869	cellular developmental process	BP
GO:0050789	regulation of biological process	BP
GO:0050790	regulation of catalytic activity	BP
GO:0050794	regulation of cellular process	BP
GO:0050896	response to stimulus	BP
GO:0051179	localization	BP
GO:0051234	establishment of localization	BP
GO:0051716	cellular response to stimulus	BP
GO:0051861	glycolipid binding	MF
GO:0060429	epithelium development	BP
GO:0060736	prostate gland growth	BP
GO:0060742	epithelial cell differentiation involved in prostate gland development	BP
GO:0061458	reproductive system development	BP
GO:0065007	biological regulation	BP
GO:0065009	regulation of molecular function	BP
GO:0070013	intracellular organelle lumen	CC
GO:0071702	organic substance transport	BP
GO:0071704	organic substance metabolic process	BP
GO:0071705	nitrogen compound transport	BP
GO:0071944	cell periphery	CC
GO:0080090	regulation of primary metabolic process	BP
GO:0097001	ceramide binding	MF
GO:0097367	carbohydrate derivative binding	MF
GO:0097708	intracellular vesicle	CC
GO:0098588	bounding membrane of organelle	CC
GO:0098772	molecular function regulator activity	MF
GO:0098805	membrane	CC
GO:0098852	lytic vacuole membrane	CC
GO:0099503	secretory vesicle	CC
GO:1901135	carbohydrate derivative metabolic process	BP
GO:1901264	carbohydrate derivative transport	BP
GO:1901564	organonitrogen compound metabolic process	BP
GO:1903509	liposaccharide metabolic process	BP
GO:1905572	ganglioside GM1 transport to membrane	BP
GO:1905573	ganglioside GM1 binding	MF
GO:1905574	ganglioside GM2 binding	MF
GO:1905575	ganglioside GM3 binding	MF
GO:1905576	ganglioside GT1b binding	MF
GO:1905577	ganglioside GP1c binding	MF

KEGG Term	Name	Description
map00600	Sphingolipid metabolism	-