PPGR - Gene Detail

Basic Information

Gene ID	gene-GBA52_020210 View in Genome Browser
Position	CM035465.1:16070996-16075809 (+) 4813bp
Gene Type	gene
Gene Description (Protein Product)	4-alpha-glucanotransferase
Organism	Prunus armeniaca
Also AS	MD15G1333300AT5G64860PRUPE_6G173200

upstream:

Domain

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Regulation&Interaction

Protein-protein interaction (PPI)

gene-GBA52_021338 Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties

gene-GBA52_027038 This protein plays a role in synthesis of starch. It catalyzes the synthesis of the activated glycosyl donor, ADP- glucose from Glc-1-P and ATP

gene-GBA52_020539 starch synthase

Regulatory gene

gene-GBA52_002041 Protein BASIC PENTACYSTEINE6-like

gene-GBA52_002344 Protein BASIC PENTACYSTEINE2-like

gene-GBA52_026930 Protein BASIC PENTACYSTEINE4-like

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Annotation

Orthologous Group

Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

Expression Profile

DataSet	Number of Samples expressed(TPM>1)	Mean	Min	Max	Standard deviation(SD)	Coeffcient variation(CV)

Select Expression

Pathway

GO Term	Description	GO Category
GO:0000023	maltose metabolic process	BP
GO:0000025	maltose catabolic process	BP
GO:0000272	polysaccharide catabolic process	BP
GO:0003674	molecular_function	MF
GO:0003824	catalytic activity	MF
GO:0004133	glycogen debranching enzyme activity	MF
GO:0004134	4-alpha-glucanotransferase activity	MF
GO:0005575	cellular_component	CC
GO:0005622	intracellular anatomical structure	CC
GO:0005623	obsolete cell	CC
GO:0005737	cytoplasm	CC
GO:0005975	carbohydrate metabolic process	BP
GO:0005976	polysaccharide metabolic process	BP
GO:0005977	glycogen metabolic process	BP
GO:0005982	starch metabolic process	BP
GO:0005983	starch catabolic process	BP
GO:0005984	disaccharide metabolic process	BP
GO:0005996	monosaccharide metabolic process	BP
GO:0006006	glucose metabolic process	BP
GO:0006073	cellular glucan metabolic process	BP
GO:0006091	generation of precursor metabolites and energy	BP
GO:0006112	energy reserve metabolic process	BP
GO:0008150	biological_process	BP
GO:0008152	metabolic process	BP
GO:0009056	catabolic process	BP
GO:0009057	macromolecule catabolic process	BP
GO:0009251	glucan catabolic process	BP
GO:0009311	oligosaccharide metabolic process	BP
GO:0009313	oligosaccharide catabolic process	BP
GO:0009501	amyloplast	CC
GO:0009507	chloroplast	CC
GO:0009536	plastid	CC
GO:0009987	cellular process	BP
GO:0015980	energy derivation by oxidation of organic compounds	BP
GO:0016052	carbohydrate catabolic process	BP
GO:0016740	transferase activity	MF
GO:0016757	glycosyltransferase activity	MF
GO:0016758	hexosyltransferase activity	MF
GO:0019318	hexose metabolic process	BP
GO:0043170	macromolecule metabolic process	BP
GO:0043226	organelle	CC
GO:0043227	membrane-bounded organelle	CC
GO:0043229	intracellular organelle	CC
GO:0043231	intracellular membrane-bounded organelle	CC
GO:0044042	glucan metabolic process	BP
GO:0044237	cellular metabolic process	BP
GO:0044238	primary metabolic process	BP
GO:0044247	cellular polysaccharide catabolic process	BP
GO:0044248	cellular catabolic process	BP
GO:0044260	cellular macromolecule metabolic process	BP
GO:0044262	cellular carbohydrate metabolic process	BP
GO:0044264	cellular polysaccharide metabolic process	BP
GO:0044275	cellular carbohydrate catabolic process	BP
GO:0044281	small molecule metabolic process	BP
GO:0044424	obsolete intracellular part	CC
GO:0044444	obsolete cytoplasmic part	CC
GO:0044464	obsolete cell part	CC
GO:0046352	disaccharide catabolic process	BP
GO:0055114	obsolete oxidation-reduction process	BP
GO:0071704	organic substance metabolic process	BP
GO:1901575	organic substance catabolic process	BP

KEGG Term	Name	Description
map01110	Biosynthesis of secondary metabolites	-
map01100	Metabolic pathways	-
map00500	Starch and sucrose metabolism	-