Basic Information
Gene ID
gene-GBA52_020954
Position
CM035465.1:24629905-24630672 (-)
767bp
Gene Type
gene
Gene Description (Protein Product)
Belongs to the PAL histidase family
Organism
Also AS MD12G1116700AT3G53260PRUPE_6G104500

Gene Structure

upstream:

Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
gene-GBA52_021063 Converts the prephenate produced from the shikimate- chorismate pathway into phenylalanine
gene-GBA52_021540 Belongs to the cytochrome P450 family
gene-GBA52_027700 4-coumarate--CoA ligase-like
Regulatory gene
gene-GBA52_000026 Zinc-finger homeodomain protein
gene-GBA52_000588 SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains
gene-GBA52_000589 SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
KEGG Term Name Description
map01110 Biosynthesis of secondary metabolites -
map01100 Metabolic pathways -
map00940 Phenylpropanoid biosynthesis Phenylpropanoids are a group of plant secondary metabolites derived from phenylalanine and having a wide variety of functions both as structural and signaling molecules. Phenylalanine is first converted to cinnamic acid by deamination. It is followed by hydroxylation and frequent methylation to generate coumaric acid and other acids with a phenylpropane (C6-C3) unit. Reduction of the CoA-activated carboxyl groups of these acids results in the corresponding aldehydes and alcohols. The alcohols are called monolignols, the starting compounds for biosynthesis of lignin.
map00360 Phenylalanine metabolism -