PPGR - Gene Detail

Basic Information

Gene Structure

Domain

Regulation&
Interaction

Annotation

Orthologus Group

Expresssion

Pathway

Basic Information

Gene ID	gene-GBA52_021016 View in Genome Browser
Position	CM035465.1:25178959-25184402 (-) 5443bp
Gene Type	gene
Gene Description (Protein Product)	Isovaleryl-CoA dehydrogenase
Organism	Prunus armeniaca
Also AS	MD03G1116100AT3G45300PRUPE_6G097600

upstream:

Domain

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Regulation&Interaction

Protein-protein interaction (PPI)	gene-GBA52_028085 methylcrotonoyl-CoA carboxylase subunit alpha gene-GBA52_027269 carboxylase beta chain gene-GBA52_021905 2-oxoisovalerate dehydrogenase subunit beta
Regulatory gene	gene-GBA52_002041 Protein BASIC PENTACYSTEINE6-like gene-GBA52_002344 Protein BASIC PENTACYSTEINE2-like gene-GBA52_026930 Protein BASIC PENTACYSTEINE4-like

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Annotation

Orthologous Group

Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

Expression Profile

DataSet	Number of Samples expressed(TPM>1)	Mean	Min	Max	Standard deviation(SD)	Coeffcient variation(CV)

Select Expression

Pathway

GO Term	Description	GO Category
GO:0000166	nucleotide binding	MF
GO:0003674	molecular_function	MF
GO:0003824	catalytic activity	MF
GO:0003853	2-methylacyl-CoA dehydrogenase activity	MF
GO:0003995	acyl-CoA dehydrogenase activity	MF
GO:0005488	binding	MF
GO:0005524	ATP binding	MF
GO:0005575	cellular_component	CC
GO:0005622	intracellular anatomical structure	CC
GO:0005623	obsolete cell	CC
GO:0005737	cytoplasm	CC
GO:0005739	mitochondrion	CC
GO:0005759	mitochondrial matrix	CC
GO:0006082	organic acid metabolic process	BP
GO:0006139	nucleobase-containing compound metabolic process	BP
GO:0006163	purine nucleotide metabolic process	BP
GO:0006195	purine nucleotide catabolic process	BP
GO:0006520	amino acid metabolic process	BP
GO:0006551	leucine metabolic process	BP
GO:0006552	leucine catabolic process	BP
GO:0006637	acyl-CoA metabolic process	BP
GO:0006725	cellular aromatic compound metabolic process	BP
GO:0006732	obsolete coenzyme metabolic process	BP
GO:0006753	nucleoside phosphate metabolic process	BP
GO:0006790	sulfur compound metabolic process	BP
GO:0006793	phosphorus metabolic process	BP
GO:0006796	phosphate-containing compound metabolic process	BP
GO:0006807	nitrogen compound metabolic process	BP
GO:0008144	obsolete drug binding	MF
GO:0008150	biological_process	BP
GO:0008152	metabolic process	BP
GO:0008470	isovaleryl-CoA dehydrogenase activity	MF
GO:0009056	catabolic process	BP
GO:0009058	biosynthetic process	BP
GO:0009063	amino acid catabolic process	BP
GO:0009081	branched-chain amino acid metabolic process	BP
GO:0009083	branched-chain amino acid catabolic process	BP
GO:0009109	obsolete coenzyme catabolic process	BP
GO:0009117	nucleotide metabolic process	BP
GO:0009150	purine ribonucleotide metabolic process	BP
GO:0009154	purine ribonucleotide catabolic process	BP
GO:0009166	nucleotide catabolic process	BP
GO:0009259	ribonucleotide metabolic process	BP
GO:0009261	ribonucleotide catabolic process	BP
GO:0009987	cellular process	BP
GO:0016054	organic acid catabolic process	BP
GO:0016491	oxidoreductase activity	MF
GO:0016627	oxidoreductase activity, acting on the CH-CH group of donors	MF
GO:0017076	purine nucleotide binding	MF
GO:0018130	heterocycle biosynthetic process	BP
GO:0019438	aromatic compound biosynthetic process	BP
GO:0019439	aromatic compound catabolic process	BP
GO:0019637	organophosphate metabolic process	BP
GO:0019693	ribose phosphate metabolic process	BP
GO:0019752	carboxylic acid metabolic process	BP
GO:0030554	adenyl nucleotide binding	MF
GO:0031974	membrane-enclosed lumen	CC
GO:0032553	ribonucleotide binding	MF
GO:0032555	purine ribonucleotide binding	MF
GO:0032559	adenyl ribonucleotide binding	MF
GO:0033865	nucleoside bisphosphate metabolic process	BP
GO:0033869	nucleoside bisphosphate catabolic process	BP
GO:0033875	ribonucleoside bisphosphate metabolic process	BP
GO:0034031	ribonucleoside bisphosphate catabolic process	BP
GO:0034032	purine nucleoside bisphosphate metabolic process	BP
GO:0034034	purine nucleoside bisphosphate catabolic process	BP
GO:0034404	nucleobase-containing small molecule biosynthetic process	BP
GO:0034641	cellular nitrogen compound metabolic process	BP
GO:0034654	nucleobase-containing compound biosynthetic process	BP
GO:0034655	nucleobase-containing compound catabolic process	BP
GO:0035337	fatty-acyl-CoA metabolic process	BP
GO:0035383	thioester metabolic process	BP
GO:0035639	purine ribonucleoside triphosphate binding	MF
GO:0036094	small molecule binding	MF
GO:0036115	fatty-acyl-CoA catabolic process	BP
GO:0043167	ion binding	MF
GO:0043168	anion binding	MF
GO:0043226	organelle	CC
GO:0043227	membrane-bounded organelle	CC
GO:0043229	intracellular organelle	CC
GO:0043231	intracellular membrane-bounded organelle	CC
GO:0043233	organelle lumen	CC
GO:0043436	oxoacid metabolic process	BP
GO:0043603	amide metabolic process	BP
GO:0044237	cellular metabolic process	BP
GO:0044238	primary metabolic process	BP
GO:0044248	cellular catabolic process	BP
GO:0044249	cellular biosynthetic process	BP
GO:0044270	cellular nitrogen compound catabolic process	BP
GO:0044271	cellular nitrogen compound biosynthetic process	BP
GO:0044273	sulfur compound catabolic process	BP
GO:0044281	small molecule metabolic process	BP
GO:0044282	small molecule catabolic process	BP
GO:0044283	small molecule biosynthetic process	BP
GO:0044422	obsolete organelle part	CC
GO:0044424	obsolete intracellular part	CC
GO:0044429	obsolete mitochondrial part	CC
GO:0044444	obsolete cytoplasmic part	CC
GO:0044446	obsolete intracellular organelle part	CC
GO:0044464	obsolete cell part	CC
GO:0046395	carboxylic acid catabolic process	BP
GO:0046434	organophosphate catabolic process	BP
GO:0046483	heterocycle metabolic process	BP
GO:0046700	heterocycle catabolic process	BP
GO:0051186	obsolete cofactor metabolic process	BP
GO:0051187	obsolete cofactor catabolic process	BP
GO:0055086	nucleobase-containing small molecule metabolic process	BP
GO:0055114	obsolete oxidation-reduction process	BP
GO:0070013	intracellular organelle lumen	CC
GO:0071704	organic substance metabolic process	BP
GO:0072521	purine-containing compound metabolic process	BP
GO:0072523	purine-containing compound catabolic process	BP
GO:0097159	organic cyclic compound binding	MF
GO:0097367	carbohydrate derivative binding	MF
GO:1901135	carbohydrate derivative metabolic process	BP
GO:1901136	carbohydrate derivative catabolic process	BP
GO:1901265	nucleoside phosphate binding	MF
GO:1901292	nucleoside phosphate catabolic process	BP
GO:1901360	organic cyclic compound metabolic process	BP
GO:1901361	organic cyclic compound catabolic process	BP
GO:1901362	organic cyclic compound biosynthetic process	BP
GO:1901363	heterocyclic compound binding	MF
GO:1901564	organonitrogen compound metabolic process	BP
GO:1901565	organonitrogen compound catabolic process	BP
GO:1901568	fatty acid derivative metabolic process	BP
GO:1901569	fatty acid derivative catabolic process	BP
GO:1901575	organic substance catabolic process	BP
GO:1901576	organic substance biosynthetic process	BP
GO:1901605	alpha-amino acid metabolic process	BP
GO:1901606	alpha-amino acid catabolic process	BP
GO:1902189	2-methylbutanoyl-CoA(4-) metabolic process	BP
GO:1902190	2-methylbutanoyl-CoA(4-) catabolic process	BP
GO:1902192	2-methylbut-2-enoyl-CoA(4-) metabolic process	BP
GO:1902195	isovaleryl-CoA(4-) metabolic process	BP
GO:1902196	isovaleryl-CoA(4-) catabolic process	BP
GO:1902198	3-methylbut-2-enoyl-CoA(4-) metabolic process	BP

KEGG Term	Name	Description
map01100	Metabolic pathways	-
map00280	Valine, leucine and isoleucine degradation	-