Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
gene-GBA52_021131
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Position
CM035465.1:26123658-26141626 (+)
17968bp
Gene Type
gene
Gene Description (Protein Product)
riboflavin biosynthesis protein
Organism
Prunus armeniaca
Also AS MD03G1100600AT5G59750PRUPE_6G085600

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
gene-GBA52_023699 Pyruvate kinase
gene-GBA52_024617 Belongs to the GDA1 CD39 NTPase family
gene-GBA52_022853 Ectonucleotide pyrophosphatase phosphodiesterase family member
Regulatory gene
gene-GBA52_002041 Protein BASIC PENTACYSTEINE6-like
gene-GBA52_002344 Protein BASIC PENTACYSTEINE2-like
gene-GBA52_026930 Protein BASIC PENTACYSTEINE4-like

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway KEGG Pathway
GO Term Description GO Category
GO:0003674 molecular_function MF
GO:0003824 catalytic activity MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0006766 vitamin metabolic process BP
GO:0006767 water-soluble vitamin metabolic process BP
GO:0006771 riboflavin metabolic process BP
GO:0006807 nitrogen compound metabolic process BP
GO:0008150 biological_process BP
GO:0008152 metabolic process BP
GO:0008686 3,4-dihydroxy-2-butanone-4-phosphate synthase activity MF
GO:0009058 biosynthetic process BP
GO:0009110 vitamin biosynthetic process BP
GO:0009231 riboflavin biosynthetic process BP
GO:0009987 cellular process BP
GO:0016829 lyase activity MF
GO:0016830 carbon-carbon lyase activity MF
GO:0017144 xenobiotic metabolic process BP
GO:0018130 heterocycle biosynthetic process BP
GO:0034641 cellular nitrogen compound metabolic process BP
GO:0042364 water-soluble vitamin biosynthetic process BP
GO:0042726 flavin-containing compound metabolic process BP
GO:0042727 flavin-containing compound biosynthetic process BP
GO:0044237 cellular metabolic process BP
GO:0044249 cellular biosynthetic process BP
GO:0044271 cellular nitrogen compound biosynthetic process BP
GO:0044281 small molecule metabolic process BP
GO:0044283 small molecule biosynthetic process BP
GO:0044424 obsolete intracellular part CC
GO:0044464 obsolete cell part CC
GO:0046483 heterocycle metabolic process BP
GO:0071704 organic substance metabolic process BP
GO:1901360 organic cyclic compound metabolic process BP
GO:1901362 organic cyclic compound biosynthetic process BP
GO:1901564 organonitrogen compound metabolic process BP
GO:1901566 organonitrogen compound biosynthetic process BP
GO:1901576 organic substance biosynthetic process BP
KEGG Term Name Description
map01110 Biosynthesis of secondary metabolites -
map01100 Metabolic pathways -
map00790 Folate biosynthesis -
map00740 Riboflavin metabolism -