Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
gene-GBA52_021143
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Position
CM035465.1:26205035-26208290 (-)
3255bp
Gene Type
gene
Gene Description (Protein Product)
methyl-CpG-binding domain-containing protein 7-like
Organism
Prunus armeniaca
Also AS MD03G1099500AT5G59800PRUPE_6G084300

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
gene-GBA52_024293 Belongs to the small heat shock protein (HSP20) family
gene-GBA52_022831 Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N- methyltransferase family
gene-GBA52_021405 repressing transcription factor binding
Regulatory gene
gene-GBA52_000447 Agamous-like MADS-box protein
gene-GBA52_000461 Agamous-like MADS-box protein AGL12
gene-GBA52_000769 MADS-box transcription factor

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0000166 nucleotide binding MF
GO:0003674 molecular_function MF
GO:0003676 nucleic acid binding MF
GO:0003677 DNA binding MF
GO:0005488 binding MF
GO:0005515 protein binding MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005634 nucleus CC
GO:0005694 chromosome CC
GO:0008150 biological_process BP
GO:0008327 methyl-CpG binding MF
GO:0009628 response to abiotic stimulus BP
GO:0009893 positive regulation of metabolic process BP
GO:0010369 chromocenter CC
GO:0010604 positive regulation of macromolecule metabolic process BP
GO:0019219 regulation of nucleobase-containing compound metabolic process BP
GO:0019222 regulation of metabolic process BP
GO:0019899 enzyme binding MF
GO:0031323 regulation of cellular metabolic process BP
GO:0031325 positive regulation of cellular metabolic process BP
GO:0036094 small molecule binding MF
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043228 non-membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0043232 intracellular non-membrane-bounded organelle CC
GO:0043565 sequence-specific DNA binding MF
GO:0044422 obsolete organelle part CC
GO:0044424 obsolete intracellular part CC
GO:0044427 obsolete chromosomal part CC
GO:0044446 obsolete intracellular organelle part CC
GO:0044464 obsolete cell part CC
GO:0045935 positive regulation of nucleobase-containing compound metabolic process BP
GO:0048518 positive regulation of biological process BP
GO:0048522 positive regulation of cellular process BP
GO:0050789 regulation of biological process BP
GO:0050794 regulation of cellular process BP
GO:0050896 response to stimulus BP
GO:0051052 regulation of DNA metabolic process BP
GO:0051054 positive regulation of DNA metabolic process BP
GO:0051171 regulation of nitrogen compound metabolic process BP
GO:0051173 positive regulation of nitrogen compound metabolic process BP
GO:0060255 regulation of macromolecule metabolic process BP
GO:0065007 biological regulation BP
GO:0080090 regulation of primary metabolic process BP
GO:0080167 response to karrikin BP
GO:0097159 organic cyclic compound binding MF
GO:0098687 chromosomal region CC
GO:1901265 nucleoside phosphate binding MF
GO:1901363 heterocyclic compound binding MF
GO:1901535 regulation of DNA demethylation BP
GO:1901537 positive regulation of DNA demethylation BP