PPGR - Gene Detail

Basic Information

Gene Structure

Domain

Regulation&
Interaction

Annotation

Orthologus Group

Expresssion

Pathway

Basic Information

Gene ID	gene-GBA52_021878 View in Genome Browser
Position	CM035465.1:31641128-31645133 (-) 4005bp
Gene Type	gene
Gene Description (Protein Product)	Belongs to the glycosyl hydrolase 1 family
Organism	Prunus armeniaca
Also AS	MD09G1243300AT5G44640PRUPE_6G019000

upstream:

Domain

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Regulation&Interaction

Protein-protein interaction (PPI)	gene-GBA52_026950 Endoglucanase gene-GBA52_026299 Endoglucanase gene-GBA52_028345 Belongs to the glycosyl hydrolase 9 (cellulase E) family
Regulatory gene	gene-GBA52_001870 dof zinc finger protein gene-GBA52_002041 Protein BASIC PENTACYSTEINE6-like gene-GBA52_002344 Protein BASIC PENTACYSTEINE2-like

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Annotation

Orthologous Group

Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

Expression Profile

DataSet	Number of Samples expressed(TPM>1)	Mean	Min	Max	Standard deviation(SD)	Coeffcient variation(CV)

Select Expression

Pathway

GO Term	Description	GO Category
GO:0003674	molecular_function	MF
GO:0003824	catalytic activity	MF
GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	MF
GO:0008150	biological_process	BP
GO:0008152	metabolic process	BP
GO:0008422	beta-glucosidase activity	MF
GO:0015926	glucosidase activity	MF
GO:0016787	hydrolase activity	MF
GO:0016798	hydrolase activity, acting on glycosyl bonds	MF
GO:0071704	organic substance metabolic process	BP
GO:1901135	carbohydrate derivative metabolic process	BP
GO:1901657	glycosyl compound metabolic process	BP

KEGG Term	Name	Description
map01110	Biosynthesis of secondary metabolites	-
map01110	Biosynthesis of secondary metabolites	-
map01100	Metabolic pathways	-
map01100	Metabolic pathways	-
map00500	Starch and sucrose metabolism	-
map00460	Cyanoamino acid metabolism	-
map00460	Cyanoamino acid metabolism	-