PPGR - Gene Detail

Basic Information

Gene ID	gene-GBA52_023608 View in Genome Browser
Position	CM035472.1:9437437-9446483 (-) 9046bp
Gene Type	gene
Gene Description (Protein Product)	Nicotinate
Organism	Prunus armeniaca
Also AS	MD02G1174500AT2G23420PRUPE_7G131500

upstream:

Domain

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Regulation&Interaction

Protein-protein interaction (PPI)

gene-GBA52_023767 uridine nucleosidase 1-like

gene-GBA52_027033 Bifunctional enzyme. Involved in de novo dTMP biosynthesis. Key enzyme in folate metabolism

gene-GBA52_024485 Catalyzes conversion of folates to polyglutamate derivatives allowing concentration of folate compounds in the cell and the intracellular retention of these cofactors, which are important substrates for most of the folate-dependent enzymes that are involved in one-carbon transfer reactions involved in purine, pyrimidine and amino acid synthesis

Target gene

gene-GBA52_000024 Belongs to the small heat shock protein (HSP20) family

gene-GBA52_000060

gene-GBA52_000061 Mitogen-activated protein kinase kinase kinase

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Annotation

Orthologous Group

Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

Expression Profile

DataSet	Number of Samples expressed(TPM>1)	Mean	Min	Max	Standard deviation(SD)	Coeffcient variation(CV)

Select Expression

Pathway

GO Term	Description	GO Category
GO:0003674	molecular_function	MF
GO:0003824	catalytic activity	MF
GO:0004516	nicotinate phosphoribosyltransferase activity	MF
GO:0005575	cellular_component	CC
GO:0005622	intracellular anatomical structure	CC
GO:0005623	obsolete cell	CC
GO:0005737	cytoplasm	CC
GO:0005829	cytosol	CC
GO:0006950	response to stress	BP
GO:0006979	response to oxidative stress	BP
GO:0008150	biological_process	BP
GO:0016874	ligase activity	MF
GO:0016879	ligase activity, forming carbon-nitrogen bonds	MF
GO:0044424	obsolete intracellular part	CC
GO:0044444	obsolete cytoplasmic part	CC
GO:0044464	obsolete cell part	CC
GO:0050896	response to stimulus	BP

KEGG Term	Name	Description
map01100	Metabolic pathways	-
map00760	Nicotinate and nicotinamide metabolism	-