PPGR - Gene Detail

Basic Information

Gene ID	gene-GBA52_026049 View in Genome Browser
Position	CM035470.1:1358974-1362938 (-) 3964bp
Gene Type	gene
Gene Description (Protein Product)	Choline ethanolamine
Organism	Prunus armeniaca
Also AS	MD10G1036100AT1G71697PRUPE_8G041800

upstream:

Domain

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Regulation&Interaction

Protein-protein interaction (PPI)

gene-GBA52_028665 Inorganic pyrophosphatase

gene-GBA52_026977 Belongs to the CDP-alcohol phosphatidyltransferase class-I family

gene-GBA52_028720 Ubiquitin exists either covalently attached to another protein, or free (unanchored). When covalently bound, it is conjugated to target proteins via an isopeptide bond either as a monomer (monoubiquitin), a polymer linked via different Lys residues of the ubiquitin (polyubiquitin chains) or a linear polymer linked via the initiator Met of the ubiquitin (linear polyubiquitin chains). Polyubiquitin chains, when attached to a target protein, have different functions depending on the Lys residue of the ubiquitin that is linked

Regulatory gene

gene-GBA52_001870 dof zinc finger protein

gene-GBA52_002902 Cyclic dof factor

gene-GBA52_002966 ethylene-responsive transcription factor

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Annotation

Orthologous Group

Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

Expression Profile

DataSet	Number of Samples expressed(TPM>1)	Mean	Min	Max	Standard deviation(SD)	Coeffcient variation(CV)

Select Expression

Pathway

GO Term	Description	GO Category
GO:0003674	molecular_function	MF
GO:0003824	catalytic activity	MF
GO:0004103	choline kinase activity	MF
GO:0004305	ethanolamine kinase activity	MF
GO:0005575	cellular_component	CC
GO:0005622	intracellular anatomical structure	CC
GO:0005623	obsolete cell	CC
GO:0005737	cytoplasm	CC
GO:0005829	cytosol	CC
GO:0006629	lipid metabolic process	BP
GO:0006644	phospholipid metabolic process	BP
GO:0006646	phosphatidylethanolamine biosynthetic process	BP
GO:0006650	glycerophospholipid metabolic process	BP
GO:0006656	phosphatidylcholine biosynthetic process	BP
GO:0006657	CDP-choline pathway	BP
GO:0006793	phosphorus metabolic process	BP
GO:0006796	phosphate-containing compound metabolic process	BP
GO:0006807	nitrogen compound metabolic process	BP
GO:0006950	response to stress	BP
GO:0008150	biological_process	BP
GO:0008152	metabolic process	BP
GO:0008610	lipid biosynthetic process	BP
GO:0008654	phospholipid biosynthetic process	BP
GO:0009058	biosynthetic process	BP
GO:0009611	response to wounding	BP
GO:0009987	cellular process	BP
GO:0016301	kinase activity	MF
GO:0016310	phosphorylation	BP
GO:0016740	transferase activity	MF
GO:0016772	transferase activity, transferring phosphorus-containing groups	MF
GO:0016773	phosphotransferase activity, alcohol group as acceptor	MF
GO:0019637	organophosphate metabolic process	BP
GO:0044237	cellular metabolic process	BP
GO:0044238	primary metabolic process	BP
GO:0044249	cellular biosynthetic process	BP
GO:0044255	cellular lipid metabolic process	BP
GO:0044424	obsolete intracellular part	CC
GO:0044444	obsolete cytoplasmic part	CC
GO:0044464	obsolete cell part	CC
GO:0045017	glycerolipid biosynthetic process	BP
GO:0046337	phosphatidylethanolamine metabolic process	BP
GO:0046470	phosphatidylcholine metabolic process	BP
GO:0046474	glycerophospholipid biosynthetic process	BP
GO:0046486	glycerolipid metabolic process	BP
GO:0050896	response to stimulus	BP
GO:0071704	organic substance metabolic process	BP
GO:0090407	organophosphate biosynthetic process	BP
GO:0097164	ammonium ion metabolic process	BP
GO:1901564	organonitrogen compound metabolic process	BP
GO:1901566	organonitrogen compound biosynthetic process	BP
GO:1901576	organic substance biosynthetic process	BP

KEGG Term	Name	Description
map01100	Metabolic pathways	-
map00564	Glycerophospholipid metabolism	-