Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
gene-GBA52_026187
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Position
CM035470.1:3344667-3345422 (+)
755bp
Gene Type
gene
Gene Description (Protein Product)
ATP synthase delta chain
Organism
Prunus armeniaca
Also AS MD17G1003000AT4G09650PRUPE_8G048900

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
gene-GBA52_026903 Soluble inorganic pyrophosphatase
gene-GBA52_028511 Subunit of the peripheral V1 complex of vacuolar ATPase. Subunit C is necessary for the assembly of the catalytic sector of the enzyme and is likely to have a specific function in its catalytic activity. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells
gene-GBA52_027767 V-type proton ATPase subunit
Regulatory gene
gene-GBA52_000267 Ethylene-responsive transcription factor SHINE
gene-GBA52_000475 ethylene-responsive transcription factor
gene-GBA52_000479 transcription factor

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway KEGG Pathway
GO Term Description GO Category
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0006091 generation of precursor metabolites and energy BP
GO:0006950 response to stress BP
GO:0006952 defense response BP
GO:0008150 biological_process BP
GO:0008152 metabolic process BP
GO:0009266 response to temperature stimulus BP
GO:0009409 response to cold BP
GO:0009507 chloroplast CC
GO:0009526 plastid envelope CC
GO:0009532 plastid stroma CC
GO:0009534 chloroplast thylakoid CC
GO:0009535 chloroplast thylakoid membrane CC
GO:0009536 plastid CC
GO:0009570 chloroplast stroma CC
GO:0009579 thylakoid CC
GO:0009605 response to external stimulus BP
GO:0009607 response to biotic stimulus BP
GO:0009617 response to bacterium BP
GO:0009628 response to abiotic stimulus BP
GO:0009719 response to endogenous stimulus BP
GO:0009725 response to hormone BP
GO:0009735 response to cytokinin BP
GO:0009767 photosynthetic electron transport chain BP
GO:0009772 photosynthetic electron transport in photosystem II BP
GO:0009773 photosynthetic electron transport in photosystem I BP
GO:0009941 chloroplast envelope CC
GO:0009987 cellular process BP
GO:0010033 response to organic substance BP
GO:0010287 plastoglobule CC
GO:0010319 stromule CC
GO:0015979 photosynthesis BP
GO:0016020 membrane CC
GO:0019684 photosynthesis, light reaction BP
GO:0022900 electron transport chain BP
GO:0031967 organelle envelope CC
GO:0031975 envelope CC
GO:0031976 plastid thylakoid CC
GO:0031984 organelle subcompartment CC
GO:0034357 photosynthetic membrane CC
GO:0042221 response to chemical BP
GO:0042651 thylakoid membrane CC
GO:0042742 defense response to bacterium BP
GO:0043207 response to external biotic stimulus BP
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0044237 cellular metabolic process BP
GO:0044422 obsolete organelle part CC
GO:0044424 obsolete intracellular part CC
GO:0044434 obsolete chloroplast part CC
GO:0044435 obsolete plastid part CC
GO:0044436 obsolete thylakoid part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044446 obsolete intracellular organelle part CC
GO:0044464 obsolete cell part CC
GO:0050896 response to stimulus BP
GO:0051704 obsolete multi-organism process BP
GO:0051707 response to other organism BP
GO:0055035 plastid thylakoid membrane CC
GO:0055114 obsolete oxidation-reduction process BP
GO:0098542 defense response to other organism BP
KEGG Term Name Description
map01100 Metabolic pathways -
map00195 Photosynthesis Photosynthesis in green plants and specialized bacteria is the process of utilizing light energy to synthesize organic compounds from carbon dioxide and water. It consists of the light dependent part (light reaction) and the light independent part (dark reaction, carbon fixation). The light reaction takes place in thylakoid, a membrane-bound compartment inside chloroplasts and cyanobacteria. The light energy is used by photosystems I and II to generate proton motive force and reducing power (NADPH or NADH). The proton motive force is used by ATP synthase to generate ATP, essentially in the same way as the mitochondrial respiratory chain. The supplies of ATP and NAD(P)H are then used to fix carbon dioxide.
map00190 Oxidative phosphorylation -