PPGR - Gene Detail

Basic Information

Gene ID	gene-GBA52_027718 View in Genome Browser
Position	CM035470.1:18573396-18576905 (-) 3509bp
Gene Type	gene
Gene Description (Protein Product)	Auxin transporter-like protein
Organism	Prunus armeniaca
Also AS	MD05G1118600AT2G21050PRUPE_8G163100

upstream:

Domain

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Regulation&Interaction

Protein-protein interaction (PPI)

gene-GBA52_028237 Protein TRANSPORT INHIBITOR RESPONSE

gene-GBA52_028720 Ubiquitin exists either covalently attached to another protein, or free (unanchored). When covalently bound, it is conjugated to target proteins via an isopeptide bond either as a monomer (monoubiquitin), a polymer linked via different Lys residues of the ubiquitin (polyubiquitin chains) or a linear polymer linked via the initiator Met of the ubiquitin (linear polyubiquitin chains). Polyubiquitin chains, when attached to a target protein, have different functions depending on the Lys residue of the ubiquitin that is linked

gene-GBA52_028507 Protein AUXIN SIGNALING F-BOX

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Annotation

Orthologous Group

Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

Expression Profile

DataSet	Number of Samples expressed(TPM>1)	Mean	Min	Max	Standard deviation(SD)	Coeffcient variation(CV)

Select Expression

Pathway

GO Term	Description	GO Category
GO:0000003	reproduction	BP
GO:0003002	regionalization	BP
GO:0003006	developmental process involved in reproduction	BP
GO:0003333	amino acid transmembrane transport	BP
GO:0003674	molecular_function	MF
GO:0005215	transporter activity	MF
GO:0005342	organic acid transmembrane transporter activity	MF
GO:0005575	cellular_component	CC
GO:0005623	obsolete cell	CC
GO:0005886	plasma membrane	CC
GO:0006810	transport	BP
GO:0006811	monoatomic ion transport	BP
GO:0006820	monoatomic anion transport	BP
GO:0006865	amino acid transport	BP
GO:0007275	multicellular organism development	BP
GO:0007389	pattern specification process	BP
GO:0008150	biological_process	BP
GO:0008509	monoatomic anion transmembrane transporter activity	MF
GO:0008514	organic anion transmembrane transporter activity	MF
GO:0009605	response to external stimulus	BP
GO:0009607	response to biotic stimulus	BP
GO:0009624	response to nematode	BP
GO:0009653	anatomical structure morphogenesis	BP
GO:0009790	embryo development	BP
GO:0009791	post-embryonic development	BP
GO:0009793	embryo development ending in seed dormancy	BP
GO:0009965	leaf morphogenesis	BP
GO:0010016	shoot system morphogenesis	BP
GO:0010051	xylem and phloem pattern formation	BP
GO:0010154	fruit development	BP
GO:0010588	cotyledon vascular tissue pattern formation	BP
GO:0015075	monoatomic ion transmembrane transporter activity	MF
GO:0015171	amino acid transmembrane transporter activity	MF
GO:0015318	inorganic molecular entity transmembrane transporter activity	MF
GO:0015711	organic anion transport	BP
GO:0015849	organic acid transport	BP
GO:0016020	membrane	CC
GO:0022414	reproductive process	BP
GO:0022622	root system development	BP
GO:0022857	transmembrane transporter activity	MF
GO:0032501	multicellular organismal process	BP
GO:0032502	developmental process	BP
GO:0034220	monoatomic ion transmembrane transport	BP
GO:0043207	response to external biotic stimulus	BP
GO:0044464	obsolete cell part	CC
GO:0046942	carboxylic acid transport	BP
GO:0046943	carboxylic acid transmembrane transporter activity	MF
GO:0048316	seed development	BP
GO:0048364	root development	BP
GO:0048366	leaf development	BP
GO:0048367	shoot system development	BP
GO:0048598	embryonic morphogenesis	BP
GO:0048608	reproductive structure development	BP
GO:0048731	system development	BP
GO:0048825	cotyledon development	BP
GO:0048826	cotyledon morphogenesis	BP
GO:0048827	phyllome development	BP
GO:0048829	root cap development	BP
GO:0048856	anatomical structure development	BP
GO:0050896	response to stimulus	BP
GO:0051179	localization	BP
GO:0051234	establishment of localization	BP
GO:0051704	obsolete multi-organism process	BP
GO:0051707	response to other organism	BP
GO:0055085	transmembrane transport	BP
GO:0061458	reproductive system development	BP
GO:0071702	organic substance transport	BP
GO:0071705	nitrogen compound transport	BP
GO:0071944	cell periphery	CC
GO:0090698	post-embryonic plant morphogenesis	BP
GO:0098656	monoatomic anion transmembrane transport	BP
GO:0099402	plant organ development	BP
GO:1903825	organic acid transmembrane transport	BP
GO:1905039	carboxylic acid transmembrane transport	BP
GO:1905392	plant organ morphogenesis	BP

KEGG Term	Name	Description
map04075	Plant hormone signal transduction	-