PPGR - Gene Detail

Basic Information

Gene ID	gene-GBA52_028291 View in Genome Browser
Position	CM035470.1:22563292-22565088 (-) 1796bp
Gene Type	gene
Gene Description (Protein Product)	CS domain
Organism	Prunus armeniaca
Also AS	MD03G1286200AT4G02450PRUPE_8G259700

upstream:

Domain

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Regulation&Interaction

Protein-protein interaction (PPI)

gene-GBA52_029063 DNA mismatch repair protein

gene-GBA52_029032 60s ribosomal protein

gene-GBA52_028421 Peptidyl-prolyl cis-trans isomerase

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Annotation

Orthologous Group

Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

Expression Profile

DataSet	Number of Samples expressed(TPM>1)	Mean	Min	Max	Standard deviation(SD)	Coeffcient variation(CV)

Select Expression

Pathway

GO Term	Description	GO Category
GO:0005575	cellular_component	CC
GO:0005622	intracellular anatomical structure	CC
GO:0005623	obsolete cell	CC
GO:0005634	nucleus	CC
GO:0005737	cytoplasm	CC
GO:0005829	cytosol	CC
GO:0005886	plasma membrane	CC
GO:0005911	cell-cell junction	CC
GO:0007275	multicellular organism development	BP
GO:0008150	biological_process	BP
GO:0009506	plasmodesma	CC
GO:0009888	tissue development	BP
GO:0009893	positive regulation of metabolic process	BP
GO:0009966	regulation of signal transduction	BP
GO:0009968	negative regulation of signal transduction	BP
GO:0010449	root meristem growth	BP
GO:0010468	regulation of gene expression	BP
GO:0010604	positive regulation of macromolecule metabolic process	BP
GO:0010628	positive regulation of gene expression	BP
GO:0010646	regulation of cell communication	BP
GO:0010648	negative regulation of cell communication	BP
GO:0010817	regulation of hormone levels	BP
GO:0016020	membrane	CC
GO:0019222	regulation of metabolic process	BP
GO:0022622	root system development	BP
GO:0023051	regulation of signaling	BP
GO:0023057	negative regulation of signaling	BP
GO:0030054	cell junction	CC
GO:0032501	multicellular organismal process	BP
GO:0032502	developmental process	BP
GO:0032879	regulation of localization	BP
GO:0035266	meristem growth	BP
GO:0040007	growth	BP
GO:0043226	organelle	CC
GO:0043227	membrane-bounded organelle	CC
GO:0043229	intracellular organelle	CC
GO:0043231	intracellular membrane-bounded organelle	CC
GO:0044424	obsolete intracellular part	CC
GO:0044444	obsolete cytoplasmic part	CC
GO:0044464	obsolete cell part	CC
GO:0048364	root development	BP
GO:0048507	meristem development	BP
GO:0048518	positive regulation of biological process	BP
GO:0048519	negative regulation of biological process	BP
GO:0048523	negative regulation of cellular process	BP
GO:0048583	regulation of response to stimulus	BP
GO:0048585	negative regulation of response to stimulus	BP
GO:0048589	developmental growth	BP
GO:0048731	system development	BP
GO:0048856	anatomical structure development	BP
GO:0050789	regulation of biological process	BP
GO:0050794	regulation of cellular process	BP
GO:0051049	regulation of transport	BP
GO:0055044	symplast	CC
GO:0060255	regulation of macromolecule metabolic process	BP
GO:0065007	biological regulation	BP
GO:0065008	regulation of biological quality	BP
GO:0071944	cell periphery	CC
GO:0080036	regulation of cytokinin-activated signaling pathway	BP
GO:0080037	negative regulation of cytokinin-activated signaling pathway	BP
GO:0099402	plant organ development	BP
GO:2000012	regulation of auxin polar transport	BP

KEGG Term	Name	Description
map01100	Metabolic pathways	-
map00590	Arachidonic acid metabolism	-