Basic Information
Gene ID
PSME_03727.g
Position
jcf7190000052997:762565-763332 (+)
767bp
Gene Type
gene
Gene Description (Protein Product)
Calcium-binding protein CML42-like
Organism
Also AS AT4G20780

Gene Structure

upstream:

Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Regulatory gene
PSME_00595.g Mini zinc finger protein
PSME_00623.g GAGA binding protein-like family
PSME_00955.g Mini zinc finger protein

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
GO Term Description GO Category
GO:0000902 cell morphogenesis BP
GO:0000904 cell morphogenesis involved in differentiation BP
GO:0003674 molecular_function MF
GO:0005488 binding MF
GO:0005509 calcium ion binding MF
GO:0008150 biological_process BP
GO:0009653 anatomical structure morphogenesis BP
GO:0009888 tissue development BP
GO:0009987 cellular process BP
GO:0010026 trichome differentiation BP
GO:0010035 response to inorganic substance BP
GO:0010038 response to metal ion BP
GO:0010090 trichome morphogenesis BP
GO:0010091 trichome branching BP
GO:0016043 cellular component organization BP
GO:0030154 cell differentiation BP
GO:0032502 developmental process BP
GO:0032989 cellular component morphogenesis BP
GO:0042221 response to chemical BP
GO:0043167 ion binding MF
GO:0043169 cation binding MF
GO:0046686 response to cadmium ion BP
GO:0046872 metal ion binding MF
GO:0048468 cell development BP
GO:0048856 anatomical structure development BP
GO:0048869 cellular developmental process BP
GO:0050896 response to stimulus BP
GO:0071840 cellular component organization or biogenesis BP
GO:0090558 plant epidermis development BP
GO:0090626 plant epidermis morphogenesis BP
KEGG Term Name Description
map04626 Plant-pathogen interaction Plants lack animal-like adaptive immunity mechanisms, and therefore have evolved a specific system with multiple layers against invading pathogens. The primary response includes the perception of pathogens by cell-surface pattern-recognition receptors (PRRs) and is referred to as PAMP-triggered immunity (PTI). Activation of FLS2 and EFR triggers MAPK signaling pathway that activates defense genes for antimictobial compounds. The increase in the cytosolic Ca2+ concentration is also a regulator for production of reactive oxygen species and localized programmed cell death/hypersensitive response. The secondary response is called effector-triggered immunity (ETI). Pathogens can acquire the ability to suppress PTI by directly injecting effector proteins into the plant cell through secretion systems. In addition, pathogens can manipulate plant hormone signaling pathways to evade host immune responses using coronatine toxin. Some plants possess specific intracellular surveillance proteins (R proteins) to monitor the presence of pathogen virulence proteins. This ETI occurs with localized programmed cell death to arrest pathogen growth, resulting in cultivar-specific disease resistance.