Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
PSME_04870.g
Position
jcf7190000286881:5804-6328 (-)
524bp
Gene Type
gene
Gene Description (Protein Product)
"Component of the nascent polypeptide-associated complex (NAC)
Organism
Pseudotsuga menziesii
Also AS AT1G33040

Gene Structure

upstream:
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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
PSME_06730.g to Saccharomyces cerevisiae RPL4A (YBR031W) and RPL4B (YDR012W)
PSME_07338.g Belongs to the ubiquitin-conjugating enzyme family
PSME_09445.g Belongs to the ubiquitin-conjugating enzyme family

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0003674 molecular_function MF
GO:0005488 binding MF
GO:0005515 protein binding MF
GO:0005543 phospholipid binding MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0005840 ribosome CC
GO:0005844 polysome CC
GO:0005854 nascent polypeptide-associated complex CC
GO:0006457 protein folding BP
GO:0006458 'de novo' protein folding BP
GO:0006605 protein targeting BP
GO:0006612 protein targeting to membrane BP
GO:0006620 post-translational protein targeting to endoplasmic reticulum membrane BP
GO:0006810 transport BP
GO:0006886 intracellular protein transport BP
GO:0008104 protein localization BP
GO:0008150 biological_process BP
GO:0008289 lipid binding MF
GO:0009986 cell surface CC
GO:0009987 cellular process BP
GO:0015031 protein transport BP
GO:0015833 peptide transport BP
GO:0032266 phosphatidylinositol-3-phosphate binding MF
GO:0032991 protein-containing complex CC
GO:0033036 macromolecule localization BP
GO:0033365 protein localization to organelle BP
GO:0034613 protein localization BP
GO:0035091 phosphatidylinositol binding MF
GO:0042788 polysomal ribosome CC
GO:0042886 amide transport BP
GO:0043167 ion binding MF
GO:0043168 anion binding MF
GO:0043226 organelle CC
GO:0043228 non-membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043232 intracellular non-membrane-bounded organelle CC
GO:0044424 obsolete intracellular part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044464 obsolete cell part CC
GO:0045047 protein targeting to ER BP
GO:0045184 establishment of protein localization BP
GO:0046907 intracellular transport BP
GO:0051082 unfolded protein binding MF
GO:0051083 'de novo' cotranslational protein folding BP
GO:0051179 localization BP
GO:0051234 establishment of localization BP
GO:0051641 cellular localization BP
GO:0051649 establishment of localization in cell BP
GO:0070273 phosphatidylinositol-4-phosphate binding MF
GO:0070300 phosphatidic acid binding MF
GO:0070727 cellular macromolecule localization BP
GO:0070972 protein localization to endoplasmic reticulum BP
GO:0071702 organic substance transport BP
GO:0071705 nitrogen compound transport BP
GO:0072594 establishment of protein localization to organelle BP
GO:0072599 establishment of protein localization to endoplasmic reticulum BP
GO:0072657 protein localization to membrane BP
GO:0080025 phosphatidylinositol-3,5-bisphosphate binding MF
GO:0090150 establishment of protein localization to membrane BP
GO:1901981 phosphatidylinositol phosphate binding MF
GO:1902936 phosphatidylinositol bisphosphate binding MF
GO:1990904 ribonucleoprotein complex CC