Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
PSME_07137.g
Position
jcf7190000312752:273-2939 (+)
2666bp
Gene Type
gene
Gene Description (Protein Product)
Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
Organism
Pseudotsuga menziesii
Also AS AT2G21790

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
PSME_31972.g ribonucleoside-diphosphate reductase
PSME_50577.g Ribonucleoside-diphosphate reductase small
PSME_14250.g ribonucleoside-diphosphate reductase small

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway KEGG Pathway
GO Term Description GO Category
GO:0000166 nucleotide binding MF
GO:0003674 molecular_function MF
GO:0003824 catalytic activity MF
GO:0004550 nucleoside diphosphate kinase activity MF
GO:0004748 ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor MF
GO:0005488 binding MF
GO:0005524 ATP binding MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005634 nucleus CC
GO:0005737 cytoplasm CC
GO:0005739 mitochondrion CC
GO:0005829 cytosol CC
GO:0005971 ribonucleoside-diphosphate reductase complex CC
GO:0006139 nucleobase-containing compound metabolic process BP
GO:0006165 nucleoside diphosphate phosphorylation BP
GO:0006213 pyrimidine nucleoside metabolic process BP
GO:0006220 pyrimidine nucleotide metabolic process BP
GO:0006221 pyrimidine nucleotide biosynthetic process BP
GO:0006235 dTTP biosynthetic process BP
GO:0006240 dCDP biosynthetic process BP
GO:0006725 cellular aromatic compound metabolic process BP
GO:0006753 nucleoside phosphate metabolic process BP
GO:0006793 phosphorus metabolic process BP
GO:0006796 phosphate-containing compound metabolic process BP
GO:0006807 nitrogen compound metabolic process BP
GO:0008144 obsolete drug binding MF
GO:0008150 biological_process BP
GO:0008152 metabolic process BP
GO:0009058 biosynthetic process BP
GO:0009116 nucleoside metabolic process BP
GO:0009117 nucleotide metabolic process BP
GO:0009119 ribonucleoside metabolic process BP
GO:0009132 nucleoside diphosphate metabolic process BP
GO:0009133 nucleoside diphosphate biosynthetic process BP
GO:0009138 pyrimidine nucleoside diphosphate metabolic process BP
GO:0009139 pyrimidine nucleoside diphosphate biosynthetic process BP
GO:0009141 nucleoside triphosphate metabolic process BP
GO:0009142 nucleoside triphosphate biosynthetic process BP
GO:0009147 pyrimidine nucleoside triphosphate metabolic process BP
GO:0009148 pyrimidine nucleoside triphosphate biosynthetic process BP
GO:0009165 nucleotide biosynthetic process BP
GO:0009185 ribonucleoside diphosphate metabolic process BP
GO:0009186 deoxyribonucleoside diphosphate metabolic process BP
GO:0009189 deoxyribonucleoside diphosphate biosynthetic process BP
GO:0009193 pyrimidine ribonucleoside diphosphate metabolic process BP
GO:0009196 pyrimidine deoxyribonucleoside diphosphate metabolic process BP
GO:0009197 pyrimidine deoxyribonucleoside diphosphate biosynthetic process BP
GO:0009200 deoxyribonucleoside triphosphate metabolic process BP
GO:0009202 deoxyribonucleoside triphosphate biosynthetic process BP
GO:0009211 pyrimidine deoxyribonucleoside triphosphate metabolic process BP
GO:0009212 pyrimidine deoxyribonucleoside triphosphate biosynthetic process BP
GO:0009218 pyrimidine ribonucleotide metabolic process BP
GO:0009219 pyrimidine deoxyribonucleotide metabolic process BP
GO:0009221 pyrimidine deoxyribonucleotide biosynthetic process BP
GO:0009259 ribonucleotide metabolic process BP
GO:0009262 deoxyribonucleotide metabolic process BP
GO:0009263 deoxyribonucleotide biosynthetic process BP
GO:0009265 2'-deoxyribonucleotide biosynthetic process BP
GO:0009394 2'-deoxyribonucleotide metabolic process BP
GO:0009987 cellular process BP
GO:0016301 kinase activity MF
GO:0016310 phosphorylation BP
GO:0016491 oxidoreductase activity MF
GO:0016725 oxidoreductase activity, acting on CH or CH2 groups MF
GO:0016728 oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor MF
GO:0016740 transferase activity MF
GO:0016772 transferase activity, transferring phosphorus-containing groups MF
GO:0016776 phosphotransferase activity, phosphate group as acceptor MF
GO:0017076 purine nucleotide binding MF
GO:0018130 heterocycle biosynthetic process BP
GO:0019205 nucleobase-containing compound kinase activity MF
GO:0019438 aromatic compound biosynthetic process BP
GO:0019637 organophosphate metabolic process BP
GO:0019692 deoxyribose phosphate metabolic process BP
GO:0019693 ribose phosphate metabolic process BP
GO:0030554 adenyl nucleotide binding MF
GO:0032553 ribonucleotide binding MF
GO:0032555 purine ribonucleotide binding MF
GO:0032559 adenyl ribonucleotide binding MF
GO:0032991 protein-containing complex CC
GO:0034641 cellular nitrogen compound metabolic process BP
GO:0034654 nucleobase-containing compound biosynthetic process BP
GO:0035639 purine ribonucleoside triphosphate binding MF
GO:0036094 small molecule binding MF
GO:0043167 ion binding MF
GO:0043168 anion binding MF
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0044237 cellular metabolic process BP
GO:0044238 primary metabolic process BP
GO:0044249 cellular biosynthetic process BP
GO:0044271 cellular nitrogen compound biosynthetic process BP
GO:0044281 small molecule metabolic process BP
GO:0044424 obsolete intracellular part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044445 obsolete cytosolic part CC
GO:0044464 obsolete cell part CC
GO:0046062 dCDP metabolic process BP
GO:0046075 dTTP metabolic process BP
GO:0046131 pyrimidine ribonucleoside metabolic process BP
GO:0046385 deoxyribose phosphate biosynthetic process BP
GO:0046483 heterocycle metabolic process BP
GO:0046704 CDP metabolic process BP
GO:0046939 nucleotide phosphorylation BP
GO:0051063 CDP reductase activity MF
GO:0055086 nucleobase-containing small molecule metabolic process BP
GO:0055114 obsolete oxidation-reduction process BP
GO:0061731 ribonucleoside-diphosphate reductase activity MF
GO:0071704 organic substance metabolic process BP
GO:0072527 pyrimidine-containing compound metabolic process BP
GO:0072528 pyrimidine-containing compound biosynthetic process BP
GO:0090407 organophosphate biosynthetic process BP
GO:0097159 organic cyclic compound binding MF
GO:0097367 carbohydrate derivative binding MF
GO:1901135 carbohydrate derivative metabolic process BP
GO:1901137 carbohydrate derivative biosynthetic process BP
GO:1901265 nucleoside phosphate binding MF
GO:1901293 nucleoside phosphate biosynthetic process BP
GO:1901360 organic cyclic compound metabolic process BP
GO:1901362 organic cyclic compound biosynthetic process BP
GO:1901363 heterocyclic compound binding MF
GO:1901564 organonitrogen compound metabolic process BP
GO:1901566 organonitrogen compound biosynthetic process BP
GO:1901576 organic substance biosynthetic process BP
GO:1901657 glycosyl compound metabolic process BP
GO:1902494 catalytic complex CC
GO:1990204 oxidoreductase complex CC
KEGG Term Name Description
map01100 Metabolic pathways -
map00480 Glutathione metabolism -
map00240 Pyrimidine metabolism -
map00230 Purine metabolism -