Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
PSME_08984.g
Position
jcf7190000448564:1443-1757 (-)
314bp
Gene Type
gene
Gene Description (Protein Product)
Belongs to the thioredoxin family
Organism
Pseudotsuga menziesii
Also AS AT5G39950

Gene Structure

upstream:
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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
PSME_21203.g GTPase of the Ras superfamily involved in regulation of coated
PSME_09514.g Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family
PSME_15674.g This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0000011 vacuole inheritance BP
GO:0000096 sulfur amino acid metabolic process BP
GO:0000097 sulfur amino acid biosynthetic process BP
GO:0000103 sulfate assimilation BP
GO:0000302 response to reactive oxygen species BP
GO:0000322 storage vacuole CC
GO:0000323 lytic vacuole CC
GO:0000324 fungal-type vacuole CC
GO:0003674 molecular_function MF
GO:0003824 catalytic activity MF
GO:0004791 thioredoxin-disulfide reductase activity MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005634 nucleus CC
GO:0005737 cytoplasm CC
GO:0005739 mitochondrion CC
GO:0005740 mitochondrial envelope CC
GO:0005758 mitochondrial intermembrane space CC
GO:0005773 vacuole CC
GO:0005829 cytosol CC
GO:0006082 organic acid metabolic process BP
GO:0006464 protein modification process BP
GO:0006518 peptide metabolic process BP
GO:0006520 amino acid metabolic process BP
GO:0006555 methionine metabolic process BP
GO:0006575 cellular modified amino acid metabolic process BP
GO:0006749 glutathione metabolic process BP
GO:0006790 sulfur compound metabolic process BP
GO:0006807 nitrogen compound metabolic process BP
GO:0006810 transport BP
GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport BP
GO:0006890 retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum BP
GO:0006950 response to stress BP
GO:0006979 response to oxidative stress BP
GO:0006996 organelle organization BP
GO:0007033 vacuole organization BP
GO:0008150 biological_process BP
GO:0008152 metabolic process BP
GO:0008652 amino acid biosynthetic process BP
GO:0009056 catabolic process BP
GO:0009058 biosynthetic process BP
GO:0009066 aspartate family amino acid metabolic process BP
GO:0009067 aspartate family amino acid biosynthetic process BP
GO:0009086 methionine biosynthetic process BP
GO:0009636 response to toxic substance BP
GO:0009987 cellular process BP
GO:0010035 response to inorganic substance BP
GO:0015035 protein-disulfide reductase activity MF
GO:0015036 disulfide oxidoreductase activity MF
GO:0016043 cellular component organization BP
GO:0016053 organic acid biosynthetic process BP
GO:0016192 vesicle-mediated transport BP
GO:0016209 antioxidant activity MF
GO:0016491 oxidoreductase activity MF
GO:0016651 oxidoreductase activity, acting on NAD(P)H MF
GO:0016667 oxidoreductase activity, acting on a sulfur group of donors MF
GO:0016668 oxidoreductase activity, acting on a sulfur group of donors, NAD(P) as acceptor MF
GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor MF
GO:0016999 antibiotic metabolic process BP
GO:0017001 antibiotic catabolic process BP
GO:0017144 xenobiotic metabolic process BP
GO:0019379 sulfate assimilation, phosphoadenylyl sulfate reduction by phosphoadenylyl-sulfate reductase (thioredoxin) BP
GO:0019419 sulfate reduction BP
GO:0019538 protein metabolic process BP
GO:0019725 cellular homeostasis BP
GO:0019752 carboxylic acid metabolic process BP
GO:0031967 organelle envelope CC
GO:0031970 organelle envelope lumen CC
GO:0031974 membrane-enclosed lumen CC
GO:0031975 envelope CC
GO:0033554 cellular response to stress BP
GO:0034599 cellular response to oxidative stress BP
GO:0034614 cellular response to reactive oxygen species BP
GO:0034641 cellular nitrogen compound metabolic process BP
GO:0035690 cellular response to xenobiotic stimulus BP
GO:0036211 protein modification process BP
GO:0042144 vacuole fusion, non-autophagic BP
GO:0042221 response to chemical BP
GO:0042493 response to xenobiotic stimulus BP
GO:0042542 response to hydrogen peroxide BP
GO:0042592 homeostatic process BP
GO:0042737 xenobiotic catabolic process BP
GO:0042743 hydrogen peroxide metabolic process BP
GO:0042744 hydrogen peroxide catabolic process BP
GO:0043094 cellular metabolic compound salvage BP
GO:0043102 amino acid salvage BP
GO:0043170 macromolecule metabolic process BP
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0043233 organelle lumen CC
GO:0043412 macromolecule modification BP
GO:0043436 oxoacid metabolic process BP
GO:0043603 amide metabolic process BP
GO:0044237 cellular metabolic process BP
GO:0044238 primary metabolic process BP
GO:0044248 cellular catabolic process BP
GO:0044249 cellular biosynthetic process BP
GO:0044260 cellular macromolecule metabolic process BP
GO:0044267 protein metabolic process BP
GO:0044272 sulfur compound biosynthetic process BP
GO:0044281 small molecule metabolic process BP
GO:0044283 small molecule biosynthetic process BP
GO:0044422 obsolete organelle part CC
GO:0044424 obsolete intracellular part CC
GO:0044429 obsolete mitochondrial part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044446 obsolete intracellular organelle part CC
GO:0044464 obsolete cell part CC
GO:0045454 cell redox homeostasis BP
GO:0046394 carboxylic acid biosynthetic process BP
GO:0046677 response to antibiotic BP
GO:0046907 intracellular transport BP
GO:0047134 protein-disulfide reductase (NAD(P)) activity MF
GO:0048193 Golgi vesicle transport BP
GO:0048284 organelle fusion BP
GO:0048308 organelle inheritance BP
GO:0048518 positive regulation of biological process BP
GO:0048522 positive regulation of cellular process BP
GO:0048583 regulation of response to stimulus BP
GO:0048584 positive regulation of response to stimulus BP
GO:0050789 regulation of biological process BP
GO:0050794 regulation of cellular process BP
GO:0050896 response to stimulus BP
GO:0051179 localization BP
GO:0051186 obsolete cofactor metabolic process BP
GO:0051187 obsolete cofactor catabolic process BP
GO:0051234 establishment of localization BP
GO:0051641 cellular localization BP
GO:0051649 establishment of localization in cell BP
GO:0051716 cellular response to stimulus BP
GO:0055114 obsolete oxidation-reduction process BP
GO:0061024 membrane organization BP
GO:0061025 membrane fusion BP
GO:0061687 detoxification of inorganic compound BP
GO:0061691 detoxification of hydrogen peroxide BP
GO:0061692 cellular detoxification of hydrogen peroxide BP
GO:0065007 biological regulation BP
GO:0065008 regulation of biological quality BP
GO:0070013 intracellular organelle lumen CC
GO:0070301 cellular response to hydrogen peroxide BP
GO:0070887 cellular response to chemical stimulus BP
GO:0071236 cellular response to antibiotic BP
GO:0071265 L-methionine biosynthetic process BP
GO:0071267 L-methionine salvage BP
GO:0071704 organic substance metabolic process BP
GO:0071840 cellular component organization or biogenesis BP
GO:0072593 reactive oxygen species metabolic process BP
GO:0080058 protein deglutathionylation BP
GO:0080134 regulation of response to stress BP
GO:0080135 regulation of cellular response to stress BP
GO:0097237 cellular response to toxic substance BP
GO:0097576 vacuole fusion BP
GO:0098754 detoxification BP
GO:0098869 cellular oxidant detoxification BP
GO:1900407 regulation of cellular response to oxidative stress BP
GO:1900409 positive regulation of cellular response to oxidative stress BP
GO:1901564 organonitrogen compound metabolic process BP
GO:1901566 organonitrogen compound biosynthetic process BP
GO:1901576 organic substance biosynthetic process BP
GO:1901605 alpha-amino acid metabolic process BP
GO:1901607 alpha-amino acid biosynthetic process BP
GO:1901700 response to oxygen-containing compound BP
GO:1901701 cellular response to oxygen-containing compound BP
GO:1902882 regulation of response to oxidative stress BP
GO:1902884 positive regulation of response to oxidative stress BP
GO:1990355 L-methionine salvage from methionine sulphoxide BP
GO:1990748 cellular detoxification BP