Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
PSME_17404.g
Position
jcf7190000056599:54921-55518 (+)
597bp
Gene Type
gene
Gene Description (Protein Product)
Belongs to the MIP aquaporin (TC 1.A.8) family
Organism
Pseudotsuga menziesii
Also AS AT1G80760

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
PSME_26884.g Regulator of chromosome condensation (RCC1) repeat
PSME_42180.g Belongs to the 14-3-3 family
PSME_23188.g Ras-related protein
Regulatory gene
PSME_03590.g Myb-like DNA-binding domain
PSME_04282.g Agamous-like MADS-box protein
PSME_05009.g transcription factor

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0003674 molecular_function MF
GO:0005215 transporter activity MF
GO:0005575 cellular_component CC
GO:0005623 obsolete cell CC
GO:0005886 plasma membrane CC
GO:0005887 plasma membrane CC
GO:0006810 transport BP
GO:0006811 monoatomic ion transport BP
GO:0006820 monoatomic anion transport BP
GO:0006855 xenobiotic transmembrane transport BP
GO:0007154 cell communication BP
GO:0008150 biological_process BP
GO:0008509 monoatomic anion transmembrane transporter activity MF
GO:0008643 carbohydrate transport BP
GO:0009605 response to external stimulus BP
GO:0009987 cellular process BP
GO:0009991 response to extracellular stimulus BP
GO:0010036 response to boron-containing substance BP
GO:0015075 monoatomic ion transmembrane transporter activity MF
GO:0015103 inorganic anion transmembrane transporter activity MF
GO:0015144 carbohydrate transmembrane transporter activity MF
GO:0015166 polyol transmembrane transporter activity MF
GO:0015168 glycerol transmembrane transporter activity MF
GO:0015204 urea transmembrane transporter activity MF
GO:0015238 xenobiotic transmembrane transporter activity MF
GO:0015318 inorganic molecular entity transmembrane transporter activity MF
GO:0015698 inorganic anion transport BP
GO:0015791 polyol transmembrane transport BP
GO:0015793 glycerol transmembrane transport BP
GO:0015840 urea transport BP
GO:0015850 organic hydroxy compound transport BP
GO:0015893 xenobiotic transport BP
GO:0016020 membrane CC
GO:0016021 membrane CC
GO:0019755 one-carbon compound transport BP
GO:0022804 active transmembrane transporter activity MF
GO:0022857 transmembrane transporter activity MF
GO:0031224 obsolete intrinsic component of membrane CC
GO:0031226 obsolete intrinsic component of plasma membrane CC
GO:0031667 response to nutrient levels BP
GO:0031668 cellular response to extracellular stimulus BP
GO:0031669 cellular response to nutrient levels BP
GO:0034219 carbohydrate transmembrane transport BP
GO:0034220 monoatomic ion transmembrane transport BP
GO:0035445 borate transmembrane transport BP
GO:0042221 response to chemical BP
GO:0042493 response to xenobiotic stimulus BP
GO:0042886 amide transport BP
GO:0042887 amide transmembrane transporter activity MF
GO:0044425 obsolete membrane part CC
GO:0044459 obsolete plasma membrane part CC
GO:0044464 obsolete cell part CC
GO:0046713 borate transport BP
GO:0046715 active borate transmembrane transporter activity MF
GO:0050896 response to stimulus BP
GO:0051179 localization BP
GO:0051234 establishment of localization BP
GO:0051716 cellular response to stimulus BP
GO:0055085 transmembrane transport BP
GO:0070887 cellular response to chemical stimulus BP
GO:0071496 cellular response to external stimulus BP
GO:0071702 organic substance transport BP
GO:0071705 nitrogen compound transport BP
GO:0071918 urea transmembrane transport BP
GO:0071944 cell periphery CC
GO:0080029 cellular response to boron-containing substance levels BP
GO:0098656 monoatomic anion transmembrane transport BP
GO:0098660 inorganic ion transmembrane transport BP
GO:0098661 inorganic anion transmembrane transport BP
GO:1901618 organic hydroxy compound transmembrane transporter activity MF