Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
PSME_28901.g
Position
jcf7190000049809:61616-62408 (+)
792bp
Gene Type
gene
Gene Description (Protein Product)
"RuBisCO catalyzes two reactions the carboxylation of D- ribulose 1
Organism
Pseudotsuga menziesii
Also AS AT1G67090

Gene Structure

upstream:
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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
PSME_51054.g D-glycerate 3-kinase
PSME_51073.g Phosphoglycolate
PSME_29793.g Phosphoglycolate
Regulatory gene
PSME_00050.g ethylene-responsive transcription factor
PSME_00087.g ethylene-responsive transcription factor
PSME_00128.g ethylene-responsive transcription factor

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway KEGG Pathway
GO Term Description GO Category
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0009507 chloroplast CC
GO:0009536 plastid CC
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0044424 obsolete intracellular part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044464 obsolete cell part CC
KEGG Term Name Description
map01110 Biosynthesis of secondary metabolites -
map01100 Metabolic pathways -
map00710 Carbon fixation in photosynthetic organisms -
map00630 Glyoxylate and dicarboxylate metabolism -