Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
PSME_33646.g
Position
jcf7190000071363:146746-182490 (+)
35744bp
Gene Type
gene
Gene Description (Protein Product)
NifU-like protein 1
Organism
Pseudotsuga menziesii
Also AS AT4G01940

Gene Structure

upstream:
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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
PSME_45344.g Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions
PSME_47129.g Protein CHLOROPLAST IMPORT APPARATUS 2-like
PSME_51166.g Monothiol glutaredoxin-S16
Regulatory gene
PSME_00623.g GAGA binding protein-like family
PSME_03183.g AP2 ERF and B3 domain-containing transcription
PSME_04282.g Agamous-like MADS-box protein

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0003674 molecular_function MF
GO:0005198 structural molecule activity MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0009507 chloroplast CC
GO:0009536 plastid CC
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0044424 obsolete intracellular part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044464 obsolete cell part CC