Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
PSME_34005.g
Position
jcf7190000076603:59969-305061 (-)
245092bp
Gene Type
gene
Gene Description (Protein Product)
"Plays a central role in 2-thiolation of mcm(5)S(2)U at tRNA wobble positions of cytosolic tRNA(Lys)
Organism
Pseudotsuga menziesii
Also AS AT5G55130

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
PSME_41345.g Cysteine desulfurase 1
PSME_38972.g Ubiquitin-fold modifier 1
PSME_43091.g Ubiquitin-like modifier-activating enzyme
Regulatory gene
PSME_00623.g GAGA binding protein-like family
PSME_09979.g Dof zinc finger protein
PSME_13054.g dof zinc finger protein

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway KEGG Pathway
GO Term Description GO Category
GO:0003674 molecular_function MF
GO:0003824 catalytic activity MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0008265 Mo-molybdopterin cofactor sulfurase activity MF
GO:0016740 transferase activity MF
GO:0016782 transferase activity, transferring sulphur-containing groups MF
GO:0016783 sulfurtransferase activity MF
GO:0044424 obsolete intracellular part CC
GO:0044464 obsolete cell part CC
KEGG Term Name Description
map04122 Sulfur relay system Ubiquitin and ubiquitin-like proteins (Ubls) are signalling messengers that control many cellular functions, such as cell proliferation, apoptosis, and DNA repair. It is suggested that Ub-protein modification evolved from prokaryotic sulfurtransfer systems. Molybdenum cofactor (Moco) and thiamin are sulfur-containing cofactors whose biosynthesis includes a key sulfur transfer step that uses unique sulfur carrier proteins, MoaD and ThiS. Ubiquitin, MoaD, and ThiS are all structurally related proteins whose C-termini are activated through adenylation by homologous E1-like enzymes. s2T biosynthesis may share similar chemistry with Moco and thiamin synthesis. In Saccharomyces cerevisiae, Urm1 and Uba4 function as part of a ubl protein conjugation system, though they have sequence homology to bacterial sulfur-transfer enzymes and the ability to function in sulfur transfer.