Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
PSME_38088.g
Position
jcf7190000258349:28423-30940 (+)
2517bp
Gene Type
gene
Gene Description (Protein Product)
to Saccharomyces cerevisiae SWE1 (YJL187C)
Organism
Pseudotsuga menziesii
Also AS AT3G20860

Gene Structure

upstream:
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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
PSME_41775.g to Saccharomyces cerevisiae SEC6 (YIL068C)
PSME_40714.g serine threonine-protein phosphatase
PSME_38288.g histone H2B

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0000075 cell cycle checkpoint signaling BP
GO:0000076 DNA replication checkpoint signaling BP
GO:0000077 DNA damage checkpoint signaling BP
GO:0000079 regulation of cyclin-dependent protein serine/threonine kinase activity BP
GO:0000086 G2/M transition of mitotic cell cycle BP
GO:0000166 nucleotide binding MF
GO:0000278 mitotic cell cycle BP
GO:0000320 re-entry into mitotic cell cycle BP
GO:0000902 cell morphogenesis BP
GO:0001932 regulation of protein phosphorylation BP
GO:0003674 molecular_function MF
GO:0003824 catalytic activity MF
GO:0004672 protein kinase activity MF
GO:0004674 protein serine/threonine kinase activity MF
GO:0004713 protein tyrosine kinase activity MF
GO:0005488 binding MF
GO:0005524 ATP binding MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005634 nucleus CC
GO:0005654 nucleoplasm CC
GO:0005737 cytoplasm CC
GO:0005815 microtubule organizing center CC
GO:0005816 spindle pole body CC
GO:0005856 cytoskeleton CC
GO:0005933 cellular bud CC
GO:0005935 cellular bud neck CC
GO:0005938 cell cortex CC
GO:0006464 protein modification process BP
GO:0006468 protein phosphorylation BP
GO:0006793 phosphorus metabolic process BP
GO:0006796 phosphate-containing compound metabolic process BP
GO:0006807 nitrogen compound metabolic process BP
GO:0006950 response to stress BP
GO:0006974 cellular response to DNA damage stimulus BP
GO:0007049 cell cycle BP
GO:0007093 mitotic cell cycle checkpoint signaling BP
GO:0007095 mitotic G2 DNA damage checkpoint signaling BP
GO:0007154 cell communication BP
GO:0007165 signal transduction BP
GO:0007346 regulation of mitotic cell cycle BP
GO:0008144 obsolete drug binding MF
GO:0008150 biological_process BP
GO:0008152 metabolic process BP
GO:0008361 regulation of cell size BP
GO:0009405 obsolete pathogenesis BP
GO:0009653 anatomical structure morphogenesis BP
GO:0009889 regulation of biosynthetic process BP
GO:0009891 positive regulation of biosynthetic process BP
GO:0009893 positive regulation of metabolic process BP
GO:0009987 cellular process BP
GO:0010389 regulation of G2/M transition of mitotic cell cycle BP
GO:0010556 regulation of macromolecule biosynthetic process BP
GO:0010564 regulation of cell cycle process BP
GO:0010639 negative regulation of organelle organization BP
GO:0010695 regulation of mitotic spindle pole body separation BP
GO:0010697 negative regulation of mitotic spindle pole body separation BP
GO:0010948 negative regulation of cell cycle process BP
GO:0010972 negative regulation of G2/M transition of mitotic cell cycle BP
GO:0015630 microtubule cytoskeleton CC
GO:0016043 cellular component organization BP
GO:0016301 kinase activity MF
GO:0016310 phosphorylation BP
GO:0016740 transferase activity MF
GO:0016772 transferase activity, transferring phosphorus-containing groups MF
GO:0016773 phosphotransferase activity, alcohol group as acceptor MF
GO:0017076 purine nucleotide binding MF
GO:0018108 peptidyl-tyrosine phosphorylation BP
GO:0018193 peptidyl-amino acid modification BP
GO:0018212 peptidyl-tyrosine modification BP
GO:0019216 regulation of lipid metabolic process BP
GO:0019220 regulation of phosphate metabolic process BP
GO:0019222 regulation of metabolic process BP
GO:0019538 protein metabolic process BP
GO:0022402 cell cycle process BP
GO:0023052 signaling BP
GO:0030427 site of polarized growth CC
GO:0030554 adenyl nucleotide binding MF
GO:0031097 medial cortex CC
GO:0031323 regulation of cellular metabolic process BP
GO:0031325 positive regulation of cellular metabolic process BP
GO:0031326 regulation of cellular biosynthetic process BP
GO:0031328 positive regulation of cellular biosynthetic process BP
GO:0031399 regulation of protein modification process BP
GO:0031570 DNA integrity checkpoint signaling BP
GO:0031572 mitotic G2 DNA damage checkpoint signaling BP
GO:0031974 membrane-enclosed lumen CC
GO:0031981 nuclear lumen CC
GO:0032153 cell division site CC
GO:0032155 obsolete cell division site part CC
GO:0032268 regulation of protein metabolic process BP
GO:0032502 developmental process BP
GO:0032535 regulation of cellular component size BP
GO:0032553 ribonucleotide binding MF
GO:0032555 purine ribonucleotide binding MF
GO:0032559 adenyl ribonucleotide binding MF
GO:0032886 regulation of microtubule-based process BP
GO:0032989 cellular component morphogenesis BP
GO:0033043 regulation of organelle organization BP
GO:0033314 mitotic DNA replication checkpoint signaling BP
GO:0033554 cellular response to stress BP
GO:0035556 intracellular signal transduction BP
GO:0035639 purine ribonucleoside triphosphate binding MF
GO:0035690 cellular response to xenobiotic stimulus BP
GO:0036094 small molecule binding MF
GO:0036211 protein modification process BP
GO:0040020 regulation of meiotic nuclear division BP
GO:0042221 response to chemical BP
GO:0042325 regulation of phosphorylation BP
GO:0042493 response to xenobiotic stimulus BP
GO:0042770 signal transduction in response to DNA damage BP
GO:0043167 ion binding MF
GO:0043168 anion binding MF
GO:0043170 macromolecule metabolic process BP
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043228 non-membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0043232 intracellular non-membrane-bounded organelle CC
GO:0043233 organelle lumen CC
GO:0043412 macromolecule modification BP
GO:0043549 regulation of kinase activity BP
GO:0044087 regulation of cellular component biogenesis BP
GO:0044237 cellular metabolic process BP
GO:0044238 primary metabolic process BP
GO:0044260 cellular macromolecule metabolic process BP
GO:0044267 protein metabolic process BP
GO:0044419 biological process involved in interspecies interaction between organisms BP
GO:0044422 obsolete organelle part CC
GO:0044424 obsolete intracellular part CC
GO:0044428 obsolete nuclear part CC
GO:0044430 obsolete cytoskeletal part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044446 obsolete intracellular organelle part CC
GO:0044448 obsolete cell cortex part CC
GO:0044464 obsolete cell part CC
GO:0044732 mitotic spindle pole body CC
GO:0044770 cell cycle phase transition BP
GO:0044772 mitotic cell cycle phase transition BP
GO:0044773 mitotic DNA damage checkpoint signaling BP
GO:0044774 mitotic DNA integrity checkpoint signaling BP
GO:0044818 mitotic G2/M transition checkpoint BP
GO:0044839 cell cycle G2/M phase transition BP
GO:0044878 mitotic cytokinesis checkpoint signaling BP
GO:0044879 mitotic morphogenesis checkpoint signaling BP
GO:0045786 negative regulation of cell cycle BP
GO:0045834 positive regulation of lipid metabolic process BP
GO:0045859 regulation of protein kinase activity BP
GO:0045930 negative regulation of mitotic cell cycle BP
GO:0046889 positive regulation of lipid biosynthetic process BP
GO:0046890 regulation of lipid biosynthetic process BP
GO:0048518 positive regulation of biological process BP
GO:0048519 negative regulation of biological process BP
GO:0048522 positive regulation of cellular process BP
GO:0048523 negative regulation of cellular process BP
GO:0048856 anatomical structure development BP
GO:0048869 cellular developmental process BP
GO:0050789 regulation of biological process BP
GO:0050790 regulation of catalytic activity BP
GO:0050794 regulation of cellular process BP
GO:0050896 response to stimulus BP
GO:0051128 regulation of cellular component organization BP
GO:0051129 negative regulation of cellular component organization BP
GO:0051171 regulation of nitrogen compound metabolic process BP
GO:0051173 positive regulation of nitrogen compound metabolic process BP
GO:0051174 regulation of phosphorus metabolic process BP
GO:0051246 regulation of protein metabolic process BP
GO:0051338 regulation of transferase activity BP
GO:0051445 regulation of meiotic cell cycle BP
GO:0051447 negative regulation of meiotic cell cycle BP
GO:0051493 regulation of cytoskeleton organization BP
GO:0051494 negative regulation of cytoskeleton organization BP
GO:0051704 obsolete multi-organism process BP
GO:0051716 cellular response to stimulus BP
GO:0051726 regulation of cell cycle BP
GO:0051783 regulation of nuclear division BP
GO:0060255 regulation of macromolecule metabolic process BP
GO:0065007 biological regulation BP
GO:0065008 regulation of biological quality BP
GO:0065009 regulation of molecular function BP
GO:0070013 intracellular organelle lumen CC
GO:0070507 regulation of microtubule cytoskeleton organization BP
GO:0070887 cellular response to chemical stimulus BP
GO:0071341 medial cortical node CC
GO:0071704 organic substance metabolic process BP
GO:0071840 cellular component organization or biogenesis BP
GO:0071900 regulation of protein serine/threonine kinase activity BP
GO:0071944 cell periphery CC
GO:0072395 cell cycle checkpoint signaling BP
GO:0072401 DNA integrity checkpoint signaling BP
GO:0072413 mitotic cell cycle checkpoint signaling BP
GO:0072422 DNA damage checkpoint signaling BP
GO:0080090 regulation of primary metabolic process BP
GO:0090066 regulation of anatomical structure size BP
GO:0090153 regulation of sphingolipid biosynthetic process BP
GO:0090154 positive regulation of sphingolipid biosynthetic process BP
GO:0097159 organic cyclic compound binding MF
GO:0097367 carbohydrate derivative binding MF
GO:0099568 cytoplasmic region CC
GO:0099738 cell cortex region CC
GO:0110030 regulation of G2/MI transition of meiotic cell cycle BP
GO:0110031 negative regulation of G2/MI transition of meiotic cell cycle BP
GO:0140096 catalytic activity, acting on a protein MF
GO:1901265 nucleoside phosphate binding MF
GO:1901363 heterocyclic compound binding MF
GO:1901564 organonitrogen compound metabolic process BP
GO:1901987 regulation of cell cycle phase transition BP
GO:1901988 negative regulation of cell cycle phase transition BP
GO:1901990 regulation of mitotic cell cycle phase transition BP
GO:1901991 negative regulation of mitotic cell cycle phase transition BP
GO:1901993 regulation of meiotic cell cycle phase transition BP
GO:1901994 negative regulation of meiotic cell cycle phase transition BP
GO:1902402 mitotic DNA damage checkpoint signaling BP
GO:1902403 mitotic DNA integrity checkpoint signaling BP
GO:1902749 regulation of cell cycle G2/M phase transition BP
GO:1902750 negative regulation of cell cycle G2/M phase transition BP
GO:1903047 mitotic cell cycle process BP
GO:1904029 regulation of cyclin-dependent protein kinase activity BP
GO:1905038 regulation of membrane lipid metabolic process BP
GO:2000241 regulation of reproductive process BP
GO:2000242 negative regulation of reproductive process BP