Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
PSME_39898.g
Position
jcf7190000024305:84863-129929 (+)
45066bp
Gene Type
gene
Gene Description (Protein Product)
Protein EARLY FLOWERING
Organism
Pseudotsuga menziesii
Also AS AT2G25930

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
PSME_50904.g Regulatory photoreceptor which exists in two forms that are reversibly interconvertible by light the Pr form that absorbs maximally in the red region of the spectrum and the Pfr form that absorbs maximally in the far-red region
PSME_48699.g Regulatory photoreceptor which exists in two forms that are reversibly interconvertible by light the Pr form that absorbs maximally in the red region of the spectrum and the Pfr form that absorbs maximally in the far-red region
PSME_48278.g Regulatory photoreceptor which exists in two forms that are reversibly interconvertible by light the Pr form that absorbs maximally in the red region of the spectrum and the Pfr form that absorbs maximally in the far-red region
Regulatory gene
PSME_00767.g transcription factor
PSME_01732.g Ocs element-binding factor
PSME_02435.g Ocs element-binding factor

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway KEGG Pathway
GO Term Description GO Category
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005634 nucleus CC
GO:0008150 biological_process BP
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0044424 obsolete intracellular part CC
GO:0044464 obsolete cell part CC
GO:0048518 positive regulation of biological process BP
GO:0048576 positive regulation of short-day photoperiodism, flowering BP
GO:0048578 positive regulation of long-day photoperiodism, flowering BP
GO:0048580 regulation of post-embryonic development BP
GO:0048582 positive regulation of post-embryonic development BP
GO:0048583 regulation of response to stimulus BP
GO:0048584 positive regulation of response to stimulus BP
GO:0048586 regulation of long-day photoperiodism, flowering BP
GO:0048587 regulation of short-day photoperiodism, flowering BP
GO:0050789 regulation of biological process BP
GO:0050793 regulation of developmental process BP
GO:0051094 positive regulation of developmental process BP
GO:0051239 regulation of multicellular organismal process BP
GO:0051240 positive regulation of multicellular organismal process BP
GO:0065007 biological regulation BP
GO:2000026 regulation of multicellular organismal development BP
GO:2000028 regulation of photoperiodism, flowering BP
GO:2000241 regulation of reproductive process BP
GO:2000243 positive regulation of reproductive process BP
KEGG Term Name Description
map04712 Circadian rhythm - plant -