Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
PSME_40380.g
Position
jcf7190000092688:204736-231186 (-)
26450bp
Gene Type
gene
Gene Description (Protein Product)
Ras-related protein
Organism
Pseudotsuga menziesii
Also AS AT1G02130

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
PSME_41467.g Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family
PSME_43484.g Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family
PSME_46438.g Ubiquitin exists either covalently attached to another protein, or free (unanchored). When covalently bound, it is conjugated to target proteins via an isopeptide bond either as a monomer (monoubiquitin), a polymer linked via different Lys residues of the ubiquitin (polyubiquitin chains) or a linear polymer linked via the initiator Met of the ubiquitin (linear polyubiquitin chains). Polyubiquitin chains, when attached to a target protein, have different functions depending on the Lys residue of the ubiquitin that is linked
Regulatory gene
PSME_01715.g transcription factor
PSME_01732.g Ocs element-binding factor
PSME_02435.g Ocs element-binding factor

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0000139 Golgi membrane CC
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0005783 endoplasmic reticulum CC
GO:0005789 endoplasmic reticulum membrane CC
GO:0005794 Golgi apparatus CC
GO:0006810 transport BP
GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport BP
GO:0008150 biological_process BP
GO:0012505 endomembrane system CC
GO:0016020 membrane CC
GO:0016192 vesicle-mediated transport BP
GO:0031090 organelle membrane CC
GO:0031984 organelle subcompartment CC
GO:0042175 nuclear outer membrane-endoplasmic reticulum membrane network CC
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0044422 obsolete organelle part CC
GO:0044424 obsolete intracellular part CC
GO:0044425 obsolete membrane part CC
GO:0044431 obsolete Golgi apparatus part CC
GO:0044432 obsolete endoplasmic reticulum part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044446 obsolete intracellular organelle part CC
GO:0044464 obsolete cell part CC
GO:0046907 intracellular transport BP
GO:0048193 Golgi vesicle transport BP
GO:0051179 localization BP
GO:0051234 establishment of localization BP
GO:0051641 cellular localization BP
GO:0051649 establishment of localization in cell BP
GO:0098588 bounding membrane of organelle CC
GO:0098791 Golgi apparatus subcompartment CC
GO:0098827 endoplasmic reticulum subcompartment CC