Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
PSME_40478.g
Position
jcf7190000023918:436737-500152 (+)
63415bp
Gene Type
gene
Gene Description (Protein Product)
photosystem I assembly
Organism
Pseudotsuga menziesii
Also AS AT2G34860

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
PSME_46532.g thiol-disulfide oxidoreductase
PSME_50133.g DnaJ Hsp40 cysteine-rich domain superfamily protein
PSME_50031.g DnaJ Hsp40 cysteine-rich domain superfamily protein
Regulatory gene
PSME_00767.g transcription factor
PSME_01732.g Ocs element-binding factor
PSME_02435.g Ocs element-binding factor

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0003674 molecular_function MF
GO:0003824 catalytic activity MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0006091 generation of precursor metabolites and energy BP
GO:0006996 organelle organization BP
GO:0007275 multicellular organism development BP
GO:0008150 biological_process BP
GO:0008152 metabolic process BP
GO:0009507 chloroplast CC
GO:0009534 chloroplast thylakoid CC
GO:0009535 chloroplast thylakoid membrane CC
GO:0009536 plastid CC
GO:0009553 embryo sac development BP
GO:0009561 megagametogenesis BP
GO:0009579 thylakoid CC
GO:0009657 plastid organization BP
GO:0009668 plastid membrane organization BP
GO:0009987 cellular process BP
GO:0010027 thylakoid membrane organization BP
GO:0015036 disulfide oxidoreductase activity MF
GO:0015979 photosynthesis BP
GO:0016020 membrane CC
GO:0016043 cellular component organization BP
GO:0016491 oxidoreductase activity MF
GO:0016651 oxidoreductase activity, acting on NAD(P)H MF
GO:0016667 oxidoreductase activity, acting on a sulfur group of donors MF
GO:0016668 oxidoreductase activity, acting on a sulfur group of donors, NAD(P) as acceptor MF
GO:0019684 photosynthesis, light reaction BP
GO:0022607 cellular component assembly BP
GO:0031976 plastid thylakoid CC
GO:0031977 thylakoid lumen CC
GO:0031984 organelle subcompartment CC
GO:0032501 multicellular organismal process BP
GO:0032502 developmental process BP
GO:0034357 photosynthetic membrane CC
GO:0034622 protein-containing complex assembly BP
GO:0042651 thylakoid membrane CC
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0043933 protein-containing complex organization BP
GO:0044085 cellular component biogenesis BP
GO:0044237 cellular metabolic process BP
GO:0044422 obsolete organelle part CC
GO:0044424 obsolete intracellular part CC
GO:0044434 obsolete chloroplast part CC
GO:0044435 obsolete plastid part CC
GO:0044436 obsolete thylakoid part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044446 obsolete intracellular organelle part CC
GO:0044464 obsolete cell part CC
GO:0047134 protein-disulfide reductase (NAD(P)) activity MF
GO:0048229 gametophyte development BP
GO:0048564 photosystem I assembly BP
GO:0048856 anatomical structure development BP
GO:0055035 plastid thylakoid membrane CC
GO:0055114 obsolete oxidation-reduction process BP
GO:0061024 membrane organization BP
GO:0065003 protein-containing complex assembly BP
GO:0071840 cellular component organization or biogenesis BP