Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
PSME_42810.g
Position
jcf7190000020864:108451-208903 (-)
100452bp
Gene Type
gene
Gene Description (Protein Product)
Belongs to the sterol desaturase family
Organism
Pseudotsuga menziesii
Also AS AT4G22756

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
PSME_49816.g ABC transporter G family member
PSME_50081.g Belongs to the class I-like SAM-binding methyltransferase superfamily. Erg6 SMT family
PSME_44886.g Belongs to the class I-like SAM-binding methyltransferase superfamily. Erg6 SMT family
Regulatory gene
PSME_09979.g Dof zinc finger protein
PSME_13054.g dof zinc finger protein
PSME_20265.g dof zinc finger protein

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway KEGG Pathway
GO Term Description GO Category
GO:0000254 C-4 methylsterol oxidase activity MF
GO:0003674 molecular_function MF
GO:0003824 catalytic activity MF
GO:0004497 monooxygenase activity MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0005783 endoplasmic reticulum CC
GO:0005789 endoplasmic reticulum membrane CC
GO:0006629 lipid metabolic process BP
GO:0006694 steroid biosynthetic process BP
GO:0008150 biological_process BP
GO:0008152 metabolic process BP
GO:0008202 steroid metabolic process BP
GO:0008610 lipid biosynthetic process BP
GO:0009058 biosynthetic process BP
GO:0009987 cellular process BP
GO:0012505 endomembrane system CC
GO:0016020 membrane CC
GO:0016125 sterol metabolic process BP
GO:0016126 sterol biosynthetic process BP
GO:0016491 oxidoreductase activity MF
GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen MF
GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen MF
GO:0030258 lipid modification BP
GO:0031984 organelle subcompartment CC
GO:0034440 lipid oxidation BP
GO:0042175 nuclear outer membrane-endoplasmic reticulum membrane network CC
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0044237 cellular metabolic process BP
GO:0044238 primary metabolic process BP
GO:0044255 cellular lipid metabolic process BP
GO:0044422 obsolete organelle part CC
GO:0044424 obsolete intracellular part CC
GO:0044425 obsolete membrane part CC
GO:0044432 obsolete endoplasmic reticulum part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044446 obsolete intracellular organelle part CC
GO:0044464 obsolete cell part CC
GO:0055114 obsolete oxidation-reduction process BP
GO:0071704 organic substance metabolic process BP
GO:0080064 4,4-dimethyl-9beta,19-cyclopropylsterol oxidation BP
GO:0098827 endoplasmic reticulum subcompartment CC
GO:1901360 organic cyclic compound metabolic process BP
GO:1901362 organic cyclic compound biosynthetic process BP
GO:1901576 organic substance biosynthetic process BP
GO:1901615 organic hydroxy compound metabolic process BP
GO:1901617 organic hydroxy compound biosynthetic process BP
KEGG Term Name Description
map01110 Biosynthesis of secondary metabolites -
map01100 Metabolic pathways -
map00100 Steroid biosynthesis -