Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
PSME_43627.g
Position
jcf7190000024454:272651-273837 (+)
1186bp
Gene Type
gene
Gene Description (Protein Product)
Belongs to the Orn Lys Arg decarboxylase class-II family. SpeA subfamily
Organism
Pseudotsuga menziesii
Also AS AT2G16500

Gene Structure

upstream:
Get Sequence

Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
PSME_50179.g Belongs to the arginase family
PSME_44696.g N-carbamoylputrescine amidase
Regulatory gene
PSME_01516.g transcription factor
PSME_03183.g AP2 ERF and B3 domain-containing transcription
PSME_04282.g Agamous-like MADS-box protein

Load All Networks

Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway KEGG Pathway
GO Term Description GO Category
GO:0001101 response to acid chemical BP
GO:0003674 molecular_function MF
GO:0003824 catalytic activity MF
GO:0005488 binding MF
GO:0005515 protein binding MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0005829 cytosol CC
GO:0006576 biogenic amine metabolic process BP
GO:0006595 polyamine metabolic process BP
GO:0006596 polyamine biosynthetic process BP
GO:0006807 nitrogen compound metabolic process BP
GO:0006950 response to stress BP
GO:0006970 response to osmotic stress BP
GO:0006979 response to oxidative stress BP
GO:0008150 biological_process BP
GO:0008152 metabolic process BP
GO:0008792 arginine decarboxylase activity MF
GO:0009058 biosynthetic process BP
GO:0009266 response to temperature stimulus BP
GO:0009308 amine metabolic process BP
GO:0009309 amine biosynthetic process BP
GO:0009409 response to cold BP
GO:0009445 putrescine metabolic process BP
GO:0009446 putrescine biosynthetic process BP
GO:0009507 chloroplast CC
GO:0009536 plastid CC
GO:0009611 response to wounding BP
GO:0009628 response to abiotic stimulus BP
GO:0009651 response to salt stress BP
GO:0009719 response to endogenous stimulus BP
GO:0009725 response to hormone BP
GO:0009737 response to abscisic acid BP
GO:0009753 response to jasmonic acid BP
GO:0009987 cellular process BP
GO:0010033 response to organic substance BP
GO:0016829 lyase activity MF
GO:0016830 carbon-carbon lyase activity MF
GO:0016831 carboxy-lyase activity MF
GO:0033993 response to lipid BP
GO:0034641 cellular nitrogen compound metabolic process BP
GO:0042221 response to chemical BP
GO:0042401 biogenic amine biosynthetic process BP
GO:0042802 identical protein binding MF
GO:0042803 protein homodimerization activity MF
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0044106 amine metabolic process BP
GO:0044237 cellular metabolic process BP
GO:0044249 cellular biosynthetic process BP
GO:0044271 cellular nitrogen compound biosynthetic process BP
GO:0044424 obsolete intracellular part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044464 obsolete cell part CC
GO:0046983 protein dimerization activity MF
GO:0050896 response to stimulus BP
GO:0071704 organic substance metabolic process BP
GO:0080167 response to karrikin BP
GO:0097164 ammonium ion metabolic process BP
GO:0097305 response to alcohol BP
GO:1901564 organonitrogen compound metabolic process BP
GO:1901566 organonitrogen compound biosynthetic process BP
GO:1901576 organic substance biosynthetic process BP
GO:1901700 response to oxygen-containing compound BP
KEGG Term Name Description
map01110 Biosynthesis of secondary metabolites -
map01100 Metabolic pathways -
map00330 Arginine and proline metabolism -