Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
PSME_48043.g
Position
jcf7190000067447:161021-266317 (-)
105296bp
Gene Type
gene
Gene Description (Protein Product)
Signal peptidase complex catalytic subunit
Organism
Pseudotsuga menziesii
Also AS AT1G52600

Gene Structure

upstream:
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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
PSME_49893.g Signal peptidase complex subunit
PSME_50997.g Belongs to the small GTPase superfamily. SAR1 family
PSME_49018.g Belongs to the MIP aquaporin (TC 1.A.8) family
Regulatory gene
PSME_03183.g AP2 ERF and B3 domain-containing transcription
PSME_04282.g Agamous-like MADS-box protein
PSME_07890.g B3 DNA binding domain

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
KEGG Pathway
KEGG Term Name Description
map03060 Protein export The protein export is the active transport of proteins from the cytoplasm to the exterior of the cell, or to the periplasmic compartment in Gram-negative bacteria. The sec dependent pathway is the general protein export system that transports newly synthesized proteins into or across the cell membrane. The translocation channel is formed from a conserved trimeric membrane protein complex, called the Sec61/SecY complex. The twin-arginine translocation (Tat) pathway is another protein transport system that transports folded proteins in bacteria, archaea, and chloroplasts. Many Tat systems comprise three functionally different membrane proteins, TatA, TatB, and TatC, but TatA and TatE seem to have overlapping functions, with TatA having by far the more important role.