Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
PSME_48104.g
Position
jcf7190000107642:24671-129449 (+)
104778bp
Gene Type
gene
Gene Description (Protein Product)
Pgr5-like
Organism
Pseudotsuga menziesii
Also AS AT4G22890

Gene Structure

upstream:
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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
PSME_49981.g Protein cornichon homolog
PSME_50226.g Photosystem I reaction center subunit
PSME_51102.g Cytochrome b6-f complex iron-sulfur subunit

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0003674 molecular_function MF
GO:0003824 catalytic activity MF
GO:0005488 binding MF
GO:0005515 protein binding MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0006091 generation of precursor metabolites and energy BP
GO:0008150 biological_process BP
GO:0008152 metabolic process BP
GO:0009507 chloroplast CC
GO:0009534 chloroplast thylakoid CC
GO:0009535 chloroplast thylakoid membrane CC
GO:0009536 plastid CC
GO:0009579 thylakoid CC
GO:0009767 photosynthetic electron transport chain BP
GO:0009773 photosynthetic electron transport in photosystem I BP
GO:0009987 cellular process BP
GO:0015979 photosynthesis BP
GO:0016020 membrane CC
GO:0016491 oxidoreductase activity MF
GO:0016730 oxidoreductase activity, acting on iron-sulfur proteins as donors MF
GO:0019684 photosynthesis, light reaction BP
GO:0019904 protein domain specific binding MF
GO:0022900 electron transport chain BP
GO:0031976 plastid thylakoid CC
GO:0031984 organelle subcompartment CC
GO:0034357 photosynthetic membrane CC
GO:0042651 thylakoid membrane CC
GO:0042802 identical protein binding MF
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0044237 cellular metabolic process BP
GO:0044422 obsolete organelle part CC
GO:0044424 obsolete intracellular part CC
GO:0044434 obsolete chloroplast part CC
GO:0044435 obsolete plastid part CC
GO:0044436 obsolete thylakoid part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044446 obsolete intracellular organelle part CC
GO:0044464 obsolete cell part CC
GO:0055035 plastid thylakoid membrane CC
GO:0055114 obsolete oxidation-reduction process BP