Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
PSME_48971.g
Position
jcf7190000008135:220716-405737 (-)
185021bp
Gene Type
gene
Gene Description (Protein Product)
5-formyltetrahydrofolate cyclo-ligase-like protein COG0212
Organism
Pseudotsuga menziesii
Also AS AT1G76730

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
PSME_49060.g Catalyzes conversion of folates to polyglutamate derivatives allowing concentration of folate compounds in the cell and the intracellular retention of these cofactors, which are important substrates for most of the folate-dependent enzymes that are involved in one-carbon transfer reactions involved in purine, pyrimidine and amino acid synthesis
PSME_51073.g Phosphoglycolate
PSME_50175.g Interconversion of serine and glycine
Regulatory gene
PSME_09851.g AP2-like ethylene-responsive transcription factor
PSME_09979.g Dof zinc finger protein
PSME_13054.g dof zinc finger protein

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway KEGG Pathway
GO Term Description GO Category
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0006403 RNA localization BP
GO:0008150 biological_process BP
GO:0008298 intracellular mRNA localization BP
GO:0009507 chloroplast CC
GO:0009536 plastid CC
GO:0033036 macromolecule localization BP
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0044424 obsolete intracellular part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044464 obsolete cell part CC
GO:0051179 localization BP
GO:0051641 cellular localization BP
GO:0070727 cellular macromolecule localization BP
KEGG Term Name Description
map01100 Metabolic pathways -
map00670 One carbon pool by folate -