Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
PSME_49002.g
Position
jcf7190000075157:126161-192718 (+)
66557bp
Gene Type
gene
Gene Description (Protein Product)
ubiquitin-like-specific protease
Organism
Pseudotsuga menziesii
Also AS AT4G15880

Gene Structure

upstream:
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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
PSME_50947.g las1-like family
PSME_50550.g Broad-specificity nucleoside monophosphate (NMP) kinase that catalyzes the reversible transfer of the terminal phosphate group between nucleoside triphosphates and monophosphates. Has also ATPase activity
PSME_51293.g SUMO-activating enzyme subunit
Regulatory gene
PSME_00031.g ZINC FINGER protein
PSME_00050.g ethylene-responsive transcription factor
PSME_00087.g ethylene-responsive transcription factor

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0003674 molecular_function MF
GO:0003824 catalytic activity MF
GO:0004175 endopeptidase activity MF
GO:0004197 cysteine-type endopeptidase activity MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005634 nucleus CC
GO:0005911 cell-cell junction CC
GO:0006464 protein modification process BP
GO:0006508 proteolysis BP
GO:0006807 nitrogen compound metabolic process BP
GO:0008150 biological_process BP
GO:0008152 metabolic process BP
GO:0008233 peptidase activity MF
GO:0008234 cysteine-type peptidase activity MF
GO:0009506 plasmodesma CC
GO:0009909 regulation of flower development BP
GO:0009911 positive regulation of flower development BP
GO:0009987 cellular process BP
GO:0016787 hydrolase activity MF
GO:0016926 protein desumoylation BP
GO:0016929 deSUMOylase activity MF
GO:0018193 peptidyl-amino acid modification BP
GO:0018205 peptidyl-lysine modification BP
GO:0019538 protein metabolic process BP
GO:0019783 ubiquitin-like protein peptidase activity MF
GO:0030054 cell junction CC
GO:0036211 protein modification process BP
GO:0043170 macromolecule metabolic process BP
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0043412 macromolecule modification BP
GO:0044237 cellular metabolic process BP
GO:0044238 primary metabolic process BP
GO:0044260 cellular macromolecule metabolic process BP
GO:0044267 protein metabolic process BP
GO:0044424 obsolete intracellular part CC
GO:0044464 obsolete cell part CC
GO:0048518 positive regulation of biological process BP
GO:0048580 regulation of post-embryonic development BP
GO:0048582 positive regulation of post-embryonic development BP
GO:0048831 regulation of shoot system development BP
GO:0050789 regulation of biological process BP
GO:0050793 regulation of developmental process BP
GO:0051094 positive regulation of developmental process BP
GO:0051239 regulation of multicellular organismal process BP
GO:0051240 positive regulation of multicellular organismal process BP
GO:0055044 symplast CC
GO:0065007 biological regulation BP
GO:0070011 peptidase activity MF
GO:0070122 obsolete isopeptidase activity MF
GO:0070137 ubiquitin-like protein-specific endopeptidase activity MF
GO:0070138 ubiquitin-like protein peptidase activity MF
GO:0070139 SUMO-specific endopeptidase activity MF
GO:0070140 deSUMOylase activity MF
GO:0070646 protein modification by small protein removal BP
GO:0070647 protein modification by small protein conjugation or removal BP
GO:0071704 organic substance metabolic process BP
GO:0140096 catalytic activity, acting on a protein MF
GO:1901564 organonitrogen compound metabolic process BP
GO:2000026 regulation of multicellular organismal development BP
GO:2000241 regulation of reproductive process BP
GO:2000243 positive regulation of reproductive process BP