Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
PSME_49480.g
Position
jcf7190000050954:660305-665227 (+)
4922bp
Gene Type
gene
Gene Description (Protein Product)
Belongs to the NPH3 family
Organism
Pseudotsuga menziesii
Also AS AT2G30520

Gene Structure

upstream:
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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
PSME_50126.g TPR repeat-containing thioredoxin
PSME_51187.g TPR repeat-containing thioredoxin
PSME_50954.g FAD binding domain of DNA photolyase
Regulatory gene
PSME_00595.g Mini zinc finger protein
PSME_00767.g transcription factor
PSME_00955.g Mini zinc finger protein

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005634 nucleus CC
GO:0005737 cytoplasm CC
GO:0008150 biological_process BP
GO:0009314 response to radiation BP
GO:0009416 response to light stimulus BP
GO:0009605 response to external stimulus BP
GO:0009606 tropism BP
GO:0009628 response to abiotic stimulus BP
GO:0009637 response to blue light BP
GO:0009638 phototropism BP
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0044424 obsolete intracellular part CC
GO:0044464 obsolete cell part CC
GO:0050896 response to stimulus BP