Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
PSME_49509.g
Position
jcf7190000032463:247864-533535 (+)
285671bp
Gene Type
gene
Gene Description (Protein Product)
WD repeat-containing protein
Organism
Pseudotsuga menziesii
Also AS AT4G01860

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
PSME_51215.g Required for the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. In the complex, it is required to stabilize and induce conformational changes of the catalytic subunit
PSME_50109.g Thyroid adenoma-associated protein homolog
PSME_50213.g Belongs to the DEAD box helicase family
Regulatory gene
PSME_00031.g ZINC FINGER protein
PSME_00528.g ZINC FINGER protein
PSME_00595.g Mini zinc finger protein

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0005829 cytosol CC
GO:0005886 plasma membrane CC
GO:0007049 cell cycle BP
GO:0007050 regulation of cell cycle BP
GO:0008150 biological_process BP
GO:0008285 negative regulation of cell population proliferation BP
GO:0009892 negative regulation of metabolic process BP
GO:0009894 regulation of catabolic process BP
GO:0009895 negative regulation of catabolic process BP
GO:0009987 cellular process BP
GO:0010506 regulation of autophagy BP
GO:0010507 negative regulation of autophagy BP
GO:0016020 membrane CC
GO:0019222 regulation of metabolic process BP
GO:0022402 cell cycle process BP
GO:0031323 regulation of cellular metabolic process BP
GO:0031324 negative regulation of cellular metabolic process BP
GO:0031329 regulation of cellular catabolic process BP
GO:0031330 negative regulation of cellular catabolic process BP
GO:0042127 regulation of cell population proliferation BP
GO:0044424 obsolete intracellular part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044464 obsolete cell part CC
GO:0045786 negative regulation of cell cycle BP
GO:0048519 negative regulation of biological process BP
GO:0048523 negative regulation of cellular process BP
GO:0050789 regulation of biological process BP
GO:0050794 regulation of cellular process BP
GO:0051726 regulation of cell cycle BP
GO:0065007 biological regulation BP
GO:0071944 cell periphery CC