Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
PSME_49613.g
Position
jcf7190000009086:320229-532144 (-)
211915bp
Gene Type
gene
Gene Description (Protein Product)
Belongs to the aldehyde dehydrogenase family
Organism
Pseudotsuga menziesii
Also AS AT3G48170

Gene Structure

upstream:
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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
PSME_51112.g ERAP1-like C-terminal domain
PSME_51132.g 4-coumarate-coa ligase
PSME_50143.g branched-chain-amino-acid aminotransferase
Regulatory gene
PSME_00050.g ethylene-responsive transcription factor
PSME_00087.g ethylene-responsive transcription factor
PSME_00128.g ethylene-responsive transcription factor

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway KEGG Pathway
GO Term Description GO Category
GO:0001101 response to acid chemical BP
GO:0003674 molecular_function MF
GO:0003824 catalytic activity MF
GO:0004029 aldehyde dehydrogenase (NAD+) activity MF
GO:0005575 cellular_component CC
GO:0005618 cell wall CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0005777 peroxisome CC
GO:0005829 cytosol CC
GO:0006950 response to stress BP
GO:0006970 response to osmotic stress BP
GO:0008150 biological_process BP
GO:0008152 metabolic process BP
GO:0008802 betaine-aldehyde dehydrogenase activity MF
GO:0009414 response to water deprivation BP
GO:0009415 response to water BP
GO:0009507 chloroplast CC
GO:0009516 leucoplast CC
GO:0009536 plastid CC
GO:0009628 response to abiotic stimulus BP
GO:0009651 response to salt stress BP
GO:0009719 response to endogenous stimulus BP
GO:0009725 response to hormone BP
GO:0009737 response to abscisic acid BP
GO:0009987 cellular process BP
GO:0010033 response to organic substance BP
GO:0010035 response to inorganic substance BP
GO:0016491 oxidoreductase activity MF
GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor MF
GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors MF
GO:0030312 external encapsulating structure CC
GO:0033554 cellular response to stress BP
GO:0033993 response to lipid BP
GO:0034059 response to anoxia BP
GO:0036293 response to decreased oxygen levels BP
GO:0036294 cellular response to decreased oxygen levels BP
GO:0042221 response to chemical BP
GO:0042579 microbody CC
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0044424 obsolete intracellular part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044464 obsolete cell part CC
GO:0050896 response to stimulus BP
GO:0051716 cellular response to stimulus BP
GO:0055114 obsolete oxidation-reduction process BP
GO:0070482 response to oxygen levels BP
GO:0070887 cellular response to chemical stimulus BP
GO:0071453 cellular response to oxygen levels BP
GO:0071454 cellular response to anoxia BP
GO:0071944 cell periphery CC
GO:0097305 response to alcohol BP
GO:1901700 response to oxygen-containing compound BP
KEGG Term Name Description
map01100 Metabolic pathways -
map00260 Glycine, serine and threonine metabolism Serine is derived from 3-phospho-D-glycerate, an intermediate of glycolysis [MD:M00020], and glycine is derived from serine. Threonine is an essential amino acid, which animals cannot synthesize. In bacteria and plants, threonine is derived from aspartate [MD:M00018].