Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
PSME_49646.g
Position
jcf7190000002891:298266-520202 (-)
221936bp
Gene Type
gene
Gene Description (Protein Product)
aarF domain-containing protein kinase At1g79600
Organism
Pseudotsuga menziesii
Also AS AT5G64940

Gene Structure

upstream:
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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
PSME_50232.g Belongs to the protein kinase superfamily. Ser Thr protein kinase family
PSME_50121.g -
PSME_51350.g Chloroplast stem-loop binding protein of 41 kDa a
Regulatory gene
PSME_00050.g ethylene-responsive transcription factor
PSME_00087.g ethylene-responsive transcription factor
PSME_00128.g ethylene-responsive transcription factor

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0000302 response to reactive oxygen species BP
GO:0003674 molecular_function MF
GO:0005215 transporter activity MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0006629 lipid metabolic process BP
GO:0006643 membrane lipid metabolic process BP
GO:0006950 response to stress BP
GO:0006979 response to oxidative stress BP
GO:0007275 multicellular organism development BP
GO:0007568 aging BP
GO:0007623 circadian rhythm BP
GO:0008150 biological_process BP
GO:0008152 metabolic process BP
GO:0008610 lipid biosynthetic process BP
GO:0009058 biosynthetic process BP
GO:0009314 response to radiation BP
GO:0009416 response to light stimulus BP
GO:0009507 chloroplast CC
GO:0009526 plastid envelope CC
GO:0009536 plastid CC
GO:0009605 response to external stimulus BP
GO:0009628 response to abiotic stimulus BP
GO:0009636 response to toxic substance BP
GO:0009642 response to light intensity BP
GO:0009644 response to high light intensity BP
GO:0009941 chloroplast envelope CC
GO:0009987 cellular process BP
GO:0009991 response to extracellular stimulus BP
GO:0010035 response to inorganic substance BP
GO:0010038 response to metal ion BP
GO:0010150 leaf senescence BP
GO:0031667 response to nutrient levels BP
GO:0031967 organelle envelope CC
GO:0031975 envelope CC
GO:0032501 multicellular organismal process BP
GO:0032502 developmental process BP
GO:0033554 cellular response to stress BP
GO:0034599 cellular response to oxidative stress BP
GO:0042221 response to chemical BP
GO:0042493 response to xenobiotic stimulus BP
GO:0042542 response to hydrogen peroxide BP
GO:0042592 homeostatic process BP
GO:0042594 response to starvation BP
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0044237 cellular metabolic process BP
GO:0044238 primary metabolic process BP
GO:0044249 cellular biosynthetic process BP
GO:0044255 cellular lipid metabolic process BP
GO:0044422 obsolete organelle part CC
GO:0044424 obsolete intracellular part CC
GO:0044434 obsolete chloroplast part CC
GO:0044435 obsolete plastid part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044446 obsolete intracellular organelle part CC
GO:0044464 obsolete cell part CC
GO:0046467 membrane lipid biosynthetic process BP
GO:0046677 response to antibiotic BP
GO:0046686 response to cadmium ion BP
GO:0048366 leaf development BP
GO:0048367 shoot system development BP
GO:0048511 rhythmic process BP
GO:0048583 regulation of response to stimulus BP
GO:0048731 system development BP
GO:0048827 phyllome development BP
GO:0048856 anatomical structure development BP
GO:0048878 chemical homeostasis BP
GO:0050789 regulation of biological process BP
GO:0050801 monoatomic ion homeostasis BP
GO:0050896 response to stimulus BP
GO:0051716 cellular response to stimulus BP
GO:0055065 obsolete metal ion homeostasis BP
GO:0055072 iron ion homeostasis BP
GO:0055076 obsolete transition metal ion homeostasis BP
GO:0055080 monoatomic cation homeostasis BP
GO:0065007 biological regulation BP
GO:0065008 regulation of biological quality BP
GO:0070887 cellular response to chemical stimulus BP
GO:0071704 organic substance metabolic process BP
GO:0080134 regulation of response to stress BP
GO:0090693 plant organ senescence BP
GO:0098771 inorganic ion homeostasis BP
GO:0099402 plant organ development BP
GO:1901031 regulation of response to reactive oxygen species BP
GO:1901576 organic substance biosynthetic process BP
GO:1901700 response to oxygen-containing compound BP
GO:1902882 regulation of response to oxidative stress BP
GO:1990641 response to iron ion starvation BP