Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
PSME_49649.g
Position
jcf7190000092755:985-177534 (+)
176549bp
Gene Type
gene
Gene Description (Protein Product)
Translocon at the outer membrane of chloroplasts
Organism
Pseudotsuga menziesii
Also AS AT3G17970

Gene Structure

upstream:
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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
PSME_50478.g Mitochondrial import receptor subunit
PSME_50150.g Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of acetylglutamate from glutamate and acetyl-CoA, and of ornithine by transacetylation between acetylornithine and glutamate
PSME_49788.g Protein RCC2 homolog
Regulatory gene
PSME_03183.g AP2 ERF and B3 domain-containing transcription
PSME_03590.g Myb-like DNA-binding domain
PSME_05009.g transcription factor

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway KEGG Pathway
GO Term Description GO Category
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0009507 chloroplast CC
GO:0009526 plastid envelope CC
GO:0009527 plastid outer membrane CC
GO:0009536 plastid CC
GO:0009707 chloroplast outer membrane CC
GO:0009941 chloroplast envelope CC
GO:0016020 membrane CC
GO:0016021 membrane CC
GO:0019867 outer membrane CC
GO:0031090 organelle membrane CC
GO:0031224 obsolete intrinsic component of membrane CC
GO:0031300 obsolete intrinsic component of organelle membrane CC
GO:0031301 obsolete integral component of organelle membrane CC
GO:0031350 obsolete intrinsic component of plastid membrane CC
GO:0031351 obsolete integral component of plastid membrane CC
GO:0031354 obsolete intrinsic component of plastid outer membrane CC
GO:0031355 obsolete integral component of plastid outer membrane CC
GO:0031358 obsolete intrinsic component of chloroplast outer membrane CC
GO:0031359 obsolete integral component of chloroplast outer membrane CC
GO:0031967 organelle envelope CC
GO:0031968 organelle outer membrane CC
GO:0031969 chloroplast membrane CC
GO:0031975 envelope CC
GO:0042170 plastid membrane CC
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0044422 obsolete organelle part CC
GO:0044424 obsolete intracellular part CC
GO:0044425 obsolete membrane part CC
GO:0044434 obsolete chloroplast part CC
GO:0044435 obsolete plastid part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044446 obsolete intracellular organelle part CC
GO:0044464 obsolete cell part CC
GO:0098588 bounding membrane of organelle CC
GO:0098805 membrane CC
KEGG Term Name Description
map01100 Metabolic pathways -
map00380 Tryptophan metabolism -
map00360 Phenylalanine metabolism -
map00330 Arginine and proline metabolism -