Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
PSME_49686.g
Position
jcf7190000012096:944244-961111 (+)
16867bp
Gene Type
gene
Gene Description (Protein Product)
50S ribosomal protein L21
Organism
Pseudotsuga menziesii
Also AS AT4G30930

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
PSME_51097.g 50S ribosomal protein L19
PSME_50016.g Ribosomal protein S16
PSME_51075.g Ribosomal protein L30 family
Regulatory gene
PSME_00595.g Mini zinc finger protein
PSME_00955.g Mini zinc finger protein
PSME_01407.g Mini zinc finger protein

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway KEGG Pathway
GO Term Description GO Category
GO:0000003 reproduction BP
GO:0000741 karyogamy BP
GO:0003674 molecular_function MF
GO:0003676 nucleic acid binding MF
GO:0003677 DNA binding MF
GO:0003735 structural constituent of ribosome MF
GO:0005198 structural molecule activity MF
GO:0005488 binding MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0005739 mitochondrion CC
GO:0006996 organelle organization BP
GO:0006997 nucleus organization BP
GO:0007275 multicellular organism development BP
GO:0008150 biological_process BP
GO:0009553 embryo sac development BP
GO:0009555 pollen development BP
GO:0009559 embryo sac central cell differentiation BP
GO:0009561 megagametogenesis BP
GO:0009566 fertilization BP
GO:0009567 double fertilization forming a zygote and endosperm BP
GO:0009987 cellular process BP
GO:0010197 polar nucleus fusion BP
GO:0016043 cellular component organization BP
GO:0019953 sexual reproduction BP
GO:0022414 reproductive process BP
GO:0030154 cell differentiation BP
GO:0032501 multicellular organismal process BP
GO:0032502 developmental process BP
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0043565 sequence-specific DNA binding MF
GO:0044424 obsolete intracellular part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044464 obsolete cell part CC
GO:0044703 multi-organism reproductive process BP
GO:0048229 gametophyte development BP
GO:0048284 organelle fusion BP
GO:0048856 anatomical structure development BP
GO:0048869 cellular developmental process BP
GO:0051704 obsolete multi-organism process BP
GO:0071840 cellular component organization or biogenesis BP
GO:0097159 organic cyclic compound binding MF
GO:1901363 heterocyclic compound binding MF
KEGG Term Name Description
map03010 Ribosome -