Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
PSME_49897.g
Position
jcf7190000030104:151411-315561 (+)
164150bp
Gene Type
gene
Gene Description (Protein Product)
MIP18 family protein At1g68310-like
Organism
Pseudotsuga menziesii
Also AS AT1G68310

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
PSME_50774.g Essential component of the cytosolic iron-sulfur (Fe S) protein assembly machinery. Required for the maturation of extramitochondrial Fe S proteins
PSME_50016.g Ribosomal protein S16
PSME_49953.g Glutaredoxin
Regulatory gene
PSME_00595.g Mini zinc finger protein
PSME_00955.g Mini zinc finger protein
PSME_01407.g Mini zinc finger protein

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0003002 regionalization BP
GO:0003674 molecular_function MF
GO:0005048 signal sequence binding MF
GO:0005488 binding MF
GO:0006139 nucleobase-containing compound metabolic process BP
GO:0006259 DNA metabolic process BP
GO:0006310 DNA recombination BP
GO:0006725 cellular aromatic compound metabolic process BP
GO:0006790 sulfur compound metabolic process BP
GO:0006807 nitrogen compound metabolic process BP
GO:0007275 multicellular organism development BP
GO:0007389 pattern specification process BP
GO:0008150 biological_process BP
GO:0008152 metabolic process BP
GO:0009798 axis specification BP
GO:0009943 adaxial/abaxial axis specification BP
GO:0009944 polarity specification of adaxial/abaxial axis BP
GO:0009955 adaxial/abaxial pattern specification BP
GO:0009987 cellular process BP
GO:0010209 vacuolar sorting signal binding MF
GO:0016043 cellular component organization BP
GO:0016226 iron-sulfur cluster assembly BP
GO:0022607 cellular component assembly BP
GO:0031163 metallo-sulfur cluster assembly BP
GO:0032501 multicellular organismal process BP
GO:0032502 developmental process BP
GO:0033218 amide binding MF
GO:0034641 cellular nitrogen compound metabolic process BP
GO:0042127 regulation of cell population proliferation BP
GO:0042277 peptide binding MF
GO:0043170 macromolecule metabolic process BP
GO:0044085 cellular component biogenesis BP
GO:0044237 cellular metabolic process BP
GO:0044238 primary metabolic process BP
GO:0044260 cellular macromolecule metabolic process BP
GO:0046483 heterocycle metabolic process BP
GO:0048518 positive regulation of biological process BP
GO:0048522 positive regulation of cellular process BP
GO:0048583 regulation of response to stimulus BP
GO:0048584 positive regulation of response to stimulus BP
GO:0048856 anatomical structure development BP
GO:0050789 regulation of biological process BP
GO:0050794 regulation of cellular process BP
GO:0051186 obsolete cofactor metabolic process BP
GO:0051726 regulation of cell cycle BP
GO:0065001 specification of axis polarity BP
GO:0065007 biological regulation BP
GO:0071704 organic substance metabolic process BP
GO:0071840 cellular component organization or biogenesis BP
GO:0080134 regulation of response to stress BP
GO:0080135 regulation of cellular response to stress BP
GO:0090304 nucleic acid metabolic process BP
GO:1901360 organic cyclic compound metabolic process BP
GO:1990067 intrachromosomal DNA recombination BP
GO:2001020 regulation of response to DNA damage stimulus BP
GO:2001022 positive regulation of response to DNA damage stimulus BP