Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
PSME_50308.g
Position
jcf7190000022611:974569-976848 (+)
2279bp
Gene Type
gene
Gene Description (Protein Product)
Protein tyrosine phosphatase activity. It is involved in the biological process described with mitotic M phase
Organism
Pseudotsuga menziesii
Also AS

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
PSME_50835.g transcription factor-like protein
PSME_50498.g The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH
PSME_51066.g The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH
Regulatory gene
PSME_00335.g Aspartate glutamate uridylate kinase family protein
PSME_00870.g Aspartate glutamate uridylate kinase family protein
PSME_02283.g Myb/SANT-like DNA-binding domain

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0000003 reproduction BP
GO:0000079 regulation of cyclin-dependent protein serine/threonine kinase activity BP
GO:0000082 G1/S transition of mitotic cell cycle BP
GO:0000086 G2/M transition of mitotic cell cycle BP
GO:0000212 meiotic spindle organization BP
GO:0000226 microtubule cytoskeleton organization BP
GO:0000278 mitotic cell cycle BP
GO:0000280 nuclear division BP
GO:0000922 spindle pole CC
GO:0001556 oocyte maturation BP
GO:0001932 regulation of protein phosphorylation BP
GO:0001934 positive regulation of protein phosphorylation BP
GO:0002009 morphogenesis of an epithelium BP
GO:0002165 instar larval or pupal development BP
GO:0003006 developmental process involved in reproduction BP
GO:0003674 molecular_function MF
GO:0003824 catalytic activity MF
GO:0004721 phosphoprotein phosphatase activity MF
GO:0004725 protein tyrosine phosphatase activity MF
GO:0005488 binding MF
GO:0005515 protein binding MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005634 nucleus CC
GO:0005654 nucleoplasm CC
GO:0005694 chromosome CC
GO:0005737 cytoplasm CC
GO:0005813 centrosome CC
GO:0005815 microtubule organizing center CC
GO:0005819 spindle CC
GO:0005829 cytosol CC
GO:0005856 cytoskeleton CC
GO:0006464 protein modification process BP
GO:0006468 protein phosphorylation BP
GO:0006470 protein dephosphorylation BP
GO:0006508 proteolysis BP
GO:0006793 phosphorus metabolic process BP
GO:0006796 phosphate-containing compound metabolic process BP
GO:0006807 nitrogen compound metabolic process BP
GO:0006996 organelle organization BP
GO:0007010 cytoskeleton organization BP
GO:0007017 microtubule-based process BP
GO:0007030 Golgi organization BP
GO:0007049 cell cycle BP
GO:0007051 spindle organization BP
GO:0007098 centrosome cycle BP
GO:0007099 centriole replication BP
GO:0007127 meiosis I BP
GO:0007143 female meiotic nuclear division BP
GO:0007144 female meiosis I BP
GO:0007275 multicellular organism development BP
GO:0007276 gamete generation BP
GO:0007281 germ cell development BP
GO:0007292 female gamete generation BP
GO:0007346 regulation of mitotic cell cycle BP
GO:0007369 gastrulation BP
GO:0007399 nervous system development BP
GO:0007422 peripheral nervous system development BP
GO:0007424 open tracheal system development BP
GO:0007444 imaginal disc development BP
GO:0007488 histoblast morphogenesis BP
GO:0007498 mesoderm development BP
GO:0007552 metamorphosis BP
GO:0007560 imaginal disc morphogenesis BP
GO:0008138 protein tyrosine/serine/threonine phosphatase activity MF
GO:0008150 biological_process BP
GO:0008152 metabolic process BP
GO:0008283 cell population proliferation BP
GO:0008284 positive regulation of cell population proliferation BP
GO:0008361 regulation of cell size BP
GO:0009314 response to radiation BP
GO:0009411 response to UV BP
GO:0009416 response to light stimulus BP
GO:0009628 response to abiotic stimulus BP
GO:0009653 anatomical structure morphogenesis BP
GO:0009790 embryo development BP
GO:0009791 post-embryonic development BP
GO:0009794 regulation of mitotic cell cycle, embryonic BP
GO:0009886 post-embryonic animal morphogenesis BP
GO:0009887 animal organ morphogenesis BP
GO:0009888 tissue development BP
GO:0009893 positive regulation of metabolic process BP
GO:0009987 cellular process BP
GO:0009994 oocyte differentiation BP
GO:0010256 endomembrane system organization BP
GO:0010562 positive regulation of phosphorus metabolic process BP
GO:0010564 regulation of cell cycle process BP
GO:0010604 positive regulation of macromolecule metabolic process BP
GO:0015630 microtubule cytoskeleton CC
GO:0016043 cellular component organization BP
GO:0016310 phosphorylation BP
GO:0016311 dephosphorylation BP
GO:0016579 protein deubiquitination BP
GO:0016787 hydrolase activity MF
GO:0016788 hydrolase activity, acting on ester bonds MF
GO:0016791 phosphatase activity MF
GO:0019220 regulation of phosphate metabolic process BP
GO:0019222 regulation of metabolic process BP
GO:0019538 protein metabolic process BP
GO:0019899 enzyme binding MF
GO:0019900 kinase binding MF
GO:0019901 protein kinase binding MF
GO:0019953 sexual reproduction BP
GO:0021700 developmental maturation BP
GO:0022402 cell cycle process BP
GO:0022412 cellular process involved in reproduction in multicellular organism BP
GO:0022414 reproductive process BP
GO:0022607 cellular component assembly BP
GO:0030154 cell differentiation BP
GO:0031023 microtubule organizing center organization BP
GO:0031323 regulation of cellular metabolic process BP
GO:0031325 positive regulation of cellular metabolic process BP
GO:0031399 regulation of protein modification process BP
GO:0031401 positive regulation of protein modification process BP
GO:0031974 membrane-enclosed lumen CC
GO:0031981 nuclear lumen CC
GO:0032268 regulation of protein metabolic process BP
GO:0032270 positive regulation of protein metabolic process BP
GO:0032465 regulation of cytokinesis BP
GO:0032467 positive regulation of cytokinesis BP
GO:0032501 multicellular organismal process BP
GO:0032502 developmental process BP
GO:0032504 multicellular organism reproduction BP
GO:0032535 regulation of cellular component size BP
GO:0033674 positive regulation of kinase activity BP
GO:0034644 cellular response to UV BP
GO:0035239 tube morphogenesis BP
GO:0035295 tube development BP
GO:0035335 peptidyl-tyrosine dephosphorylation BP
GO:0036211 protein modification process BP
GO:0040019 positive regulation of embryonic development BP
GO:0042127 regulation of cell population proliferation BP
GO:0042325 regulation of phosphorylation BP
GO:0042327 positive regulation of phosphorylation BP
GO:0042578 phosphoric ester hydrolase activity MF
GO:0043085 positive regulation of catalytic activity BP
GO:0043170 macromolecule metabolic process BP
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043228 non-membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0043232 intracellular non-membrane-bounded organelle CC
GO:0043233 organelle lumen CC
GO:0043412 macromolecule modification BP
GO:0043549 regulation of kinase activity BP
GO:0044085 cellular component biogenesis BP
GO:0044093 positive regulation of molecular function BP
GO:0044237 cellular metabolic process BP
GO:0044238 primary metabolic process BP
GO:0044260 cellular macromolecule metabolic process BP
GO:0044267 protein metabolic process BP
GO:0044422 obsolete organelle part CC
GO:0044424 obsolete intracellular part CC
GO:0044428 obsolete nuclear part CC
GO:0044430 obsolete cytoskeletal part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044446 obsolete intracellular organelle part CC
GO:0044464 obsolete cell part CC
GO:0044703 multi-organism reproductive process BP
GO:0044770 cell cycle phase transition BP
GO:0044772 mitotic cell cycle phase transition BP
GO:0044839 cell cycle G2/M phase transition BP
GO:0044843 cell cycle G1/S phase transition BP
GO:0045786 negative regulation of cell cycle BP
GO:0045787 positive regulation of cell cycle BP
GO:0045792 negative regulation of cell size BP
GO:0045859 regulation of protein kinase activity BP
GO:0045860 positive regulation of protein kinase activity BP
GO:0045930 negative regulation of mitotic cell cycle BP
GO:0045931 positive regulation of mitotic cell cycle BP
GO:0045937 positive regulation of phosphate metabolic process BP
GO:0045977 positive regulation of mitotic cell cycle, embryonic BP
GO:0045995 regulation of embryonic development BP
GO:0048285 organelle fission BP
GO:0048468 cell development BP
GO:0048469 cell maturation BP
GO:0048477 oogenesis BP
GO:0048513 animal organ development BP
GO:0048518 positive regulation of biological process BP
GO:0048519 negative regulation of biological process BP
GO:0048522 positive regulation of cellular process BP
GO:0048523 negative regulation of cellular process BP
GO:0048563 post-embryonic animal organ morphogenesis BP
GO:0048569 post-embryonic animal organ development BP
GO:0048598 embryonic morphogenesis BP
GO:0048599 oocyte development BP
GO:0048609 multicellular organismal reproductive process BP
GO:0048707 instar larval or pupal morphogenesis BP
GO:0048729 tissue morphogenesis BP
GO:0048731 system development BP
GO:0048856 anatomical structure development BP
GO:0048869 cellular developmental process BP
GO:0050789 regulation of biological process BP
GO:0050790 regulation of catalytic activity BP
GO:0050793 regulation of developmental process BP
GO:0050794 regulation of cellular process BP
GO:0050896 response to stimulus BP
GO:0051087 chaperone binding MF
GO:0051094 positive regulation of developmental process BP
GO:0051171 regulation of nitrogen compound metabolic process BP
GO:0051173 positive regulation of nitrogen compound metabolic process BP
GO:0051174 regulation of phosphorus metabolic process BP
GO:0051239 regulation of multicellular organismal process BP
GO:0051240 positive regulation of multicellular organismal process BP
GO:0051246 regulation of protein metabolic process BP
GO:0051247 positive regulation of protein metabolic process BP
GO:0051298 centrosome duplication BP
GO:0051302 regulation of cell division BP
GO:0051321 meiotic cell cycle BP
GO:0051338 regulation of transferase activity BP
GO:0051347 positive regulation of transferase activity BP
GO:0051704 obsolete multi-organism process BP
GO:0051716 cellular response to stimulus BP
GO:0051726 regulation of cell cycle BP
GO:0051781 positive regulation of cell division BP
GO:0060255 regulation of macromolecule metabolic process BP
GO:0060305 regulation of cell diameter BP
GO:0060429 epithelium development BP
GO:0060541 respiratory system development BP
GO:0060562 epithelial tube morphogenesis BP
GO:0061982 meiosis I cell cycle process BP
GO:0065007 biological regulation BP
GO:0065008 regulation of biological quality BP
GO:0065009 regulation of molecular function BP
GO:0070013 intracellular organelle lumen CC
GO:0070646 protein modification by small protein removal BP
GO:0070647 protein modification by small protein conjugation or removal BP
GO:0070925 organelle assembly BP
GO:0071214 cellular response to abiotic stimulus BP
GO:0071478 cellular response to radiation BP
GO:0071482 cellular response to light stimulus BP
GO:0071695 anatomical structure maturation BP
GO:0071704 organic substance metabolic process BP
GO:0071840 cellular component organization or biogenesis BP
GO:0071900 regulation of protein serine/threonine kinase activity BP
GO:0080090 regulation of primary metabolic process BP
GO:0090066 regulation of anatomical structure size BP
GO:0090068 positive regulation of cell cycle process BP
GO:0098534 centriole assembly BP
GO:0104004 cellular response to environmental stimulus BP
GO:0140013 meiotic nuclear division BP
GO:0140096 catalytic activity, acting on a protein MF
GO:1901564 organonitrogen compound metabolic process BP
GO:1903046 meiotic cell cycle process BP
GO:1903047 mitotic cell cycle process BP
GO:1904029 regulation of cyclin-dependent protein kinase activity BP
GO:2000026 regulation of multicellular organismal development BP