Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
PSME_50465.g
Position
jcf7190000066933:160628-216611 (+)
55983bp
Gene Type
gene
Gene Description (Protein Product)
Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IV subfamily
Organism
Pseudotsuga menziesii
Also AS AT1G17500

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
PSME_51124.g serine threonine-protein kinase
Regulatory gene
PSME_03590.g Myb-like DNA-binding domain
PSME_05009.g transcription factor
PSME_05954.g DnaJ homolog, subfamily C, member

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0003674 molecular_function MF
GO:0003824 catalytic activity MF
GO:0004012 ATPase-coupled intramembrane lipid transporter activity MF
GO:0005215 transporter activity MF
GO:0005319 lipid transporter activity MF
GO:0005548 phospholipid transporter activity MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0005794 Golgi apparatus CC
GO:0005802 trans-Golgi network CC
GO:0005886 plasma membrane CC
GO:0006810 transport BP
GO:0006811 monoatomic ion transport BP
GO:0006820 monoatomic anion transport BP
GO:0006869 lipid transport BP
GO:0006900 vesicle budding from membrane BP
GO:0006996 organelle organization BP
GO:0008150 biological_process BP
GO:0009987 cellular process BP
GO:0010876 lipid localization BP
GO:0012505 endomembrane system CC
GO:0015711 organic anion transport BP
GO:0015748 organophosphate ester transport BP
GO:0015914 phospholipid transport BP
GO:0016020 membrane CC
GO:0016043 cellular component organization BP
GO:0016050 vesicle organization BP
GO:0016192 vesicle-mediated transport BP
GO:0016462 pyrophosphatase activity MF
GO:0016787 hydrolase activity MF
GO:0016817 hydrolase activity, acting on acid anhydrides MF
GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides MF
GO:0016887 ATP hydrolysis activity MF
GO:0017111 ribonucleoside triphosphate phosphatase activity MF
GO:0031984 organelle subcompartment CC
GO:0033036 macromolecule localization BP
GO:0034204 lipid translocation BP
GO:0042623 ATP hydrolysis activity MF
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0043492 ATPase-coupled transmembrane transporter activity MF
GO:0044422 obsolete organelle part CC
GO:0044424 obsolete intracellular part CC
GO:0044431 obsolete Golgi apparatus part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044446 obsolete intracellular organelle part CC
GO:0044464 obsolete cell part CC
GO:0045332 phospholipid translocation BP
GO:0048193 Golgi vesicle transport BP
GO:0048194 Golgi vesicle budding BP
GO:0051179 localization BP
GO:0051234 establishment of localization BP
GO:0061024 membrane organization BP
GO:0065007 biological regulation BP
GO:0065008 regulation of biological quality BP
GO:0071702 organic substance transport BP
GO:0071840 cellular component organization or biogenesis BP
GO:0071944 cell periphery CC
GO:0097035 regulation of membrane lipid distribution BP
GO:0098791 Golgi apparatus subcompartment CC