Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
PSME_50502.g
Position
jcf7190000010238:371846-630031 (-)
258185bp
Gene Type
gene
Gene Description (Protein Product)
metal-nicotianamine transporter YSL6
Organism
Pseudotsuga menziesii
Also AS AT3G27020

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
PSME_51157.g Metal transporter
PSME_50991.g CDGSH iron-sulfur domain-containing protein
PSME_50774.g Essential component of the cytosolic iron-sulfur (Fe S) protein assembly machinery. Required for the maturation of extramitochondrial Fe S proteins
Regulatory gene
PSME_01516.g transcription factor
PSME_01715.g transcription factor
PSME_01732.g Ocs element-binding factor

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0003674 molecular_function MF
GO:0005215 transporter activity MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0005773 vacuole CC
GO:0005774 vacuolar membrane CC
GO:0006810 transport BP
GO:0008150 biological_process BP
GO:0016020 membrane CC
GO:0022857 transmembrane transporter activity MF
GO:0031090 organelle membrane CC
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0044422 obsolete organelle part CC
GO:0044424 obsolete intracellular part CC
GO:0044437 obsolete vacuolar part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044446 obsolete intracellular organelle part CC
GO:0044464 obsolete cell part CC
GO:0051179 localization BP
GO:0051234 establishment of localization BP
GO:0055085 transmembrane transport BP
GO:0098588 bounding membrane of organelle CC
GO:0098805 membrane CC