Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
PSME_50521.g
Position
jcf7190000033601:19721-202224 (+)
182503bp
Gene Type
gene
Gene Description (Protein Product)
Rab subfamily of small GTPases
Organism
Pseudotsuga menziesii
Also AS AT2G44610

Gene Structure

upstream:
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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
PSME_51328.g Belongs to the ubiquitin-conjugating enzyme family
PSME_51373.g Belongs to the ATG8 family
PSME_51103.g AtCASP,CASP
Regulatory gene
PSME_00367.g Belongs to the GRAS family
PSME_00402.g Belongs to the GRAS family
PSME_00739.g Belongs to the GRAS family

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0005794 Golgi apparatus CC
GO:0006810 transport BP
GO:0006890 retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum BP
GO:0006891 intra-Golgi vesicle-mediated transport BP
GO:0008150 biological_process BP
GO:0012505 endomembrane system CC
GO:0016192 vesicle-mediated transport BP
GO:0016197 endosomal transport BP
GO:0016482 cytosolic transport BP
GO:0042147 retrograde transport, endosome to Golgi BP
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0044424 obsolete intracellular part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044464 obsolete cell part CC
GO:0046907 intracellular transport BP
GO:0048193 Golgi vesicle transport BP
GO:0051179 localization BP
GO:0051234 establishment of localization BP
GO:0051641 cellular localization BP
GO:0051649 establishment of localization in cell BP