Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
PSME_50849.g
Position
jcf7190000036075:377534-427391 (-)
49857bp
Gene Type
gene
Gene Description (Protein Product)
serine threonine-protein kinase
Organism
Pseudotsuga menziesii
Also AS AT5G18700

Gene Structure

upstream:
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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
PSME_51067.g serine-type endopeptidase activity
PSME_51261.g Belongs to the short-chain dehydrogenases reductases (SDR) family
PSME_51011.g Deoxyuridine 5'-triphosphate
Regulatory gene
PSME_10012.g NAC transcription factor
PSME_10289.g GATA transcription factor
PSME_10737.g WRKY transcription factor

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0000003 reproduction BP
GO:0000226 microtubule cytoskeleton organization BP
GO:0000278 mitotic cell cycle BP
GO:0000281 mitotic cytokinesis BP
GO:0000910 cytokinesis BP
GO:0000911 cytokinesis by cell plate formation BP
GO:0000912 assembly of actomyosin apparatus involved in cytokinesis BP
GO:0000914 phragmoplast assembly BP
GO:0001932 regulation of protein phosphorylation BP
GO:0003006 developmental process involved in reproduction BP
GO:0003674 molecular_function MF
GO:0005488 binding MF
GO:0005515 protein binding MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0005819 spindle CC
GO:0005856 cytoskeleton CC
GO:0005911 cell-cell junction CC
GO:0006996 organelle organization BP
GO:0007010 cytoskeleton organization BP
GO:0007017 microtubule-based process BP
GO:0007049 cell cycle BP
GO:0007275 multicellular organism development BP
GO:0007349 cellularization BP
GO:0007399 nervous system development BP
GO:0008017 microtubule binding MF
GO:0008092 cytoskeletal protein binding MF
GO:0008150 biological_process BP
GO:0009506 plasmodesma CC
GO:0009524 phragmoplast CC
GO:0009555 pollen development BP
GO:0009556 microsporogenesis BP
GO:0009574 preprophase band CC
GO:0009653 anatomical structure morphogenesis BP
GO:0009966 regulation of signal transduction BP
GO:0009987 cellular process BP
GO:0010245 radial microtubular system formation BP
GO:0010342 endosperm cellularization BP
GO:0010646 regulation of cell communication BP
GO:0010975 regulation of neuron projection development BP
GO:0015630 microtubule cytoskeleton CC
GO:0015631 tubulin binding MF
GO:0016043 cellular component organization BP
GO:0019220 regulation of phosphate metabolic process BP
GO:0019222 regulation of metabolic process BP
GO:0019953 sexual reproduction BP
GO:0022008 neurogenesis BP
GO:0022402 cell cycle process BP
GO:0022414 reproductive process BP
GO:0022607 cellular component assembly BP
GO:0023051 regulation of signaling BP
GO:0030054 cell junction CC
GO:0030154 cell differentiation BP
GO:0030334 regulation of cell migration BP
GO:0031323 regulation of cellular metabolic process BP
GO:0031344 regulation of cell projection organization BP
GO:0031399 regulation of protein modification process BP
GO:0032268 regulation of protein metabolic process BP
GO:0032501 multicellular organismal process BP
GO:0032502 developmental process BP
GO:0032506 cytokinetic process BP
GO:0032872 regulation of stress-activated MAPK cascade BP
GO:0032879 regulation of localization BP
GO:0034293 sexual sporulation BP
GO:0040012 regulation of locomotion BP
GO:0042325 regulation of phosphorylation BP
GO:0043226 organelle CC
GO:0043228 non-membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043232 intracellular non-membrane-bounded organelle CC
GO:0043408 regulation of MAPK cascade BP
GO:0043934 sporulation BP
GO:0044085 cellular component biogenesis BP
GO:0044422 obsolete organelle part CC
GO:0044424 obsolete intracellular part CC
GO:0044430 obsolete cytoskeletal part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044446 obsolete intracellular organelle part CC
GO:0044464 obsolete cell part CC
GO:0044703 multi-organism reproductive process BP
GO:0045595 regulation of cell differentiation BP
GO:0045664 regulation of neuron differentiation BP
GO:0046328 regulation of JNK cascade BP
GO:0048229 gametophyte development BP
GO:0048236 plant-type sporogenesis BP
GO:0048583 regulation of response to stimulus BP
GO:0048646 anatomical structure formation involved in morphogenesis BP
GO:0048699 generation of neurons BP
GO:0048731 system development BP
GO:0048856 anatomical structure development BP
GO:0048869 cellular developmental process BP
GO:0050767 regulation of neurogenesis BP
GO:0050789 regulation of biological process BP
GO:0050793 regulation of developmental process BP
GO:0050794 regulation of cellular process BP
GO:0051128 regulation of cellular component organization BP
GO:0051171 regulation of nitrogen compound metabolic process BP
GO:0051174 regulation of phosphorus metabolic process BP
GO:0051239 regulation of multicellular organismal process BP
GO:0051246 regulation of protein metabolic process BP
GO:0051270 obsolete regulation of cellular component movement BP
GO:0051301 cell division BP
GO:0051321 meiotic cell cycle BP
GO:0051704 obsolete multi-organism process BP
GO:0051960 regulation of nervous system development BP
GO:0055044 symplast CC
GO:0060255 regulation of macromolecule metabolic process BP
GO:0060284 regulation of cell development BP
GO:0061640 cytoskeleton-dependent cytokinesis BP
GO:0065007 biological regulation BP
GO:0070302 regulation of stress-activated protein kinase signaling cascade BP
GO:0071840 cellular component organization or biogenesis BP
GO:0080090 regulation of primary metabolic process BP
GO:0080134 regulation of response to stress BP
GO:0080135 regulation of cellular response to stress BP
GO:0090036 regulation of protein kinase C signaling BP
GO:0120035 regulation of plasma membrane bounded cell projection organization BP
GO:1900744 regulation of p38MAPK cascade BP
GO:1902407 assembly of actomyosin apparatus involved in mitotic cytokinesis BP
GO:1902410 mitotic cytokinetic process BP
GO:1902531 regulation of intracellular signal transduction BP
GO:1903046 meiotic cell cycle process BP
GO:1903047 mitotic cell cycle process BP
GO:2000026 regulation of multicellular organismal development BP
GO:2000145 regulation of cell motility BP
GO:2001222 regulation of neuron migration BP