Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
PSME_50877.g
Position
jcf7190000046617:287592-527634 (+)
240042bp
Gene Type
gene
Gene Description (Protein Product)
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the transport of calcium
Organism
Pseudotsuga menziesii
Also AS AT4G37640

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Regulatory gene
PSME_00767.g transcription factor
PSME_03183.g AP2 ERF and B3 domain-containing transcription
PSME_03590.g Myb-like DNA-binding domain

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0003674 molecular_function MF
GO:0003824 catalytic activity MF
GO:0005215 transporter activity MF
GO:0005216 monoatomic ion channel activity MF
GO:0005261 monoatomic cation channel activity MF
GO:0005262 calcium channel activity MF
GO:0005388 P-type calcium transporter activity MF
GO:0005488 binding MF
GO:0005515 protein binding MF
GO:0005516 calmodulin binding MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0005783 endoplasmic reticulum CC
GO:0005789 endoplasmic reticulum membrane CC
GO:0005886 plasma membrane CC
GO:0005887 plasma membrane CC
GO:0006810 transport BP
GO:0006811 monoatomic ion transport BP
GO:0006812 monoatomic cation transport BP
GO:0006816 calcium ion transport BP
GO:0007275 multicellular organism development BP
GO:0008150 biological_process BP
GO:0008324 monoatomic cation transmembrane transporter activity MF
GO:0009507 chloroplast CC
GO:0009526 plastid envelope CC
GO:0009528 plastid inner membrane CC
GO:0009536 plastid CC
GO:0009555 pollen development BP
GO:0009706 chloroplast inner membrane CC
GO:0009941 chloroplast envelope CC
GO:0012505 endomembrane system CC
GO:0015075 monoatomic ion transmembrane transporter activity MF
GO:0015085 calcium ion transmembrane transporter activity MF
GO:0015267 channel activity MF
GO:0015318 inorganic molecular entity transmembrane transporter activity MF
GO:0015399 primary active transmembrane transporter activity MF
GO:0015405 ATPase-coupled transmembrane transporter activity MF
GO:0015662 P-type ion transporter activity MF
GO:0016020 membrane CC
GO:0016021 membrane CC
GO:0016462 pyrophosphatase activity MF
GO:0016787 hydrolase activity MF
GO:0016817 hydrolase activity, acting on acid anhydrides MF
GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides MF
GO:0016887 ATP hydrolysis activity MF
GO:0017111 ribonucleoside triphosphate phosphatase activity MF
GO:0019829 ATPase-coupled monoatomic cation transmembrane transporter activity MF
GO:0019866 organelle inner membrane CC
GO:0022803 passive transmembrane transporter activity MF
GO:0022804 active transmembrane transporter activity MF
GO:0022838 channel activity MF
GO:0022853 active monoatomic ion transmembrane transporter activity MF
GO:0022857 transmembrane transporter activity MF
GO:0022890 inorganic cation transmembrane transporter activity MF
GO:0030001 metal ion transport BP
GO:0031090 organelle membrane CC
GO:0031224 obsolete intrinsic component of membrane CC
GO:0031226 obsolete intrinsic component of plasma membrane CC
GO:0031967 organelle envelope CC
GO:0031969 chloroplast membrane CC
GO:0031975 envelope CC
GO:0031984 organelle subcompartment CC
GO:0032501 multicellular organismal process BP
GO:0032502 developmental process BP
GO:0034220 monoatomic ion transmembrane transport BP
GO:0042170 plastid membrane CC
GO:0042175 nuclear outer membrane-endoplasmic reticulum membrane network CC
GO:0042623 ATP hydrolysis activity MF
GO:0042625 ATPase-coupled ion transmembrane transporter activity MF
GO:0042626 ATPase-coupled transmembrane transporter activity MF
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0043492 ATPase-coupled transmembrane transporter activity MF
GO:0044422 obsolete organelle part CC
GO:0044424 obsolete intracellular part CC
GO:0044425 obsolete membrane part CC
GO:0044432 obsolete endoplasmic reticulum part CC
GO:0044434 obsolete chloroplast part CC
GO:0044435 obsolete plastid part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044446 obsolete intracellular organelle part CC
GO:0044459 obsolete plasma membrane part CC
GO:0044464 obsolete cell part CC
GO:0046873 metal ion transmembrane transporter activity MF
GO:0048229 gametophyte development BP
GO:0048856 anatomical structure development BP
GO:0051179 localization BP
GO:0051234 establishment of localization BP
GO:0055085 transmembrane transport BP
GO:0070588 calcium ion transmembrane transport BP
GO:0070838 metal ion transport BP
GO:0071944 cell periphery CC
GO:0072511 inorganic cation transmembrane transport BP
GO:0090662 transmembrane transport BP
GO:0098655 monoatomic cation transmembrane transport BP
GO:0098660 inorganic ion transmembrane transport BP
GO:0098662 inorganic cation transmembrane transport BP
GO:0098827 endoplasmic reticulum subcompartment CC
GO:0099131 monoatomic ion transmembrane transport BP
GO:0099132 monoatomic cation transmembrane transport BP