Basic Information
Gene ID
PSME_50879.g
Position
jcf7190000038385:119029-388402 (+)
269373bp
Gene Type
gene
Gene Description (Protein Product)
Lycopene epsilon cyclase
Organism
Also AS AT5G57030

Gene Structure

upstream:

Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
PSME_51106.g isomerase
PSME_51279.g Flavin containing amine oxidoreductase
PSME_51278.g Belongs to the FBPase class 1 family
Regulatory gene
PSME_00767.g transcription factor
PSME_01516.g transcription factor
PSME_01715.g transcription factor

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
GO Term Description GO Category
GO:0003674 molecular_function MF
GO:0003824 catalytic activity MF
GO:0006629 lipid metabolic process BP
GO:0006720 isoprenoid metabolic process BP
GO:0006721 terpenoid metabolic process BP
GO:0008150 biological_process BP
GO:0008152 metabolic process BP
GO:0008299 isoprenoid biosynthetic process BP
GO:0008610 lipid biosynthetic process BP
GO:0009058 biosynthetic process BP
GO:0009975 cyclase activity MF
GO:0009987 cellular process BP
GO:0016108 tetraterpenoid metabolic process BP
GO:0016109 tetraterpenoid biosynthetic process BP
GO:0016114 terpenoid biosynthetic process BP
GO:0016116 carotenoid metabolic process BP
GO:0016117 carotenoid biosynthetic process BP
GO:0016122 xanthophyll metabolic process BP
GO:0016123 xanthophyll biosynthetic process BP
GO:0016853 isomerase activity MF
GO:0016860 intramolecular oxidoreductase activity MF
GO:0042440 pigment metabolic process BP
GO:0044237 cellular metabolic process BP
GO:0044238 primary metabolic process BP
GO:0044249 cellular biosynthetic process BP
GO:0044255 cellular lipid metabolic process BP
GO:0045435 lycopene epsilon cyclase activity MF
GO:0046148 pigment biosynthetic process BP
GO:0071704 organic substance metabolic process BP
GO:1901576 organic substance biosynthetic process BP
KEGG Term Name Description
map01110 Biosynthesis of secondary metabolites -
map01100 Metabolic pathways -
map00906 Carotenoid biosynthesis -