Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
PSME_50892.g
Position
jcf7190000032725:65164-92136 (-)
26972bp
Gene Type
gene
Gene Description (Protein Product)
"atexp20
Organism
Pseudotsuga menziesii
Also AS AT3G55500

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
PSME_51378.g Sodium hydrogen exchanger
PSME_51086.g asparagine--tRNA ligase, chloroplastic
Regulatory gene
PSME_09979.g Dof zinc finger protein
PSME_13054.g dof zinc finger protein
PSME_20265.g dof zinc finger protein

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0005575 cellular_component CC
GO:0005618 cell wall CC
GO:0005623 obsolete cell CC
GO:0006949 syncytium formation BP
GO:0008150 biological_process BP
GO:0009628 response to abiotic stimulus BP
GO:0009653 anatomical structure morphogenesis BP
GO:0009987 cellular process BP
GO:0016020 membrane CC
GO:0030312 external encapsulating structure CC
GO:0032502 developmental process BP
GO:0044464 obsolete cell part CC
GO:0048646 anatomical structure formation involved in morphogenesis BP
GO:0048856 anatomical structure development BP
GO:0050896 response to stimulus BP
GO:0071944 cell periphery CC
GO:0080167 response to karrikin BP