Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
PSME_51061.g
Position
jcf7190000008062:183640-246197 (-)
62557bp
Gene Type
gene
Gene Description (Protein Product)
tryptophan synthase beta chain
Organism
Pseudotsuga menziesii
Also AS AT5G38530

Gene Structure

upstream:
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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
PSME_51263.g indole-3-glycerol phosphate synthase
PSME_51187.g TPR repeat-containing thioredoxin
PSME_51262.g methyltransferase PMT13
Regulatory gene
PSME_00767.g transcription factor
PSME_03183.g AP2 ERF and B3 domain-containing transcription
PSME_03590.g Myb-like DNA-binding domain

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
KEGG Pathway
KEGG Term Name Description
map01110 Biosynthesis of secondary metabolites -
map01100 Metabolic pathways -
map00400 Phenylalanine, tyrosine and tryptophan biosynthesis -
map00260 Glycine, serine and threonine metabolism Serine is derived from 3-phospho-D-glycerate, an intermediate of glycolysis [MD:M00020], and glycine is derived from serine. Threonine is an essential amino acid, which animals cannot synthesize. In bacteria and plants, threonine is derived from aspartate [MD:M00018].