Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
PSME_51207.g
Position
jcf7190000003371:285782-613583 (-)
327801bp
Gene Type
gene
Gene Description (Protein Product)
YL1 nuclear protein
Organism
Pseudotsuga menziesii
Also AS AT2G36740

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
PSME_51373.g Belongs to the ATG8 family
Regulatory gene
PSME_00031.g ZINC FINGER protein
PSME_00528.g ZINC FINGER protein
PSME_00672.g zinc finger

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005634 nucleus CC
GO:0006325 chromatin organization BP
GO:0006338 chromatin remodeling BP
GO:0006996 organelle organization BP
GO:0008150 biological_process BP
GO:0009987 cellular process BP
GO:0016043 cellular component organization BP
GO:0034728 nucleosome organization BP
GO:0043044 chromatin remodeling BP
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0043486 obsolete histone exchange BP
GO:0043933 protein-containing complex organization BP
GO:0044424 obsolete intracellular part CC
GO:0044464 obsolete cell part CC
GO:0051276 chromosome organization BP
GO:0071824 protein-DNA complex subunit organization BP
GO:0071840 cellular component organization or biogenesis BP