Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
PSME_51356.g
Position
jcf7190000017731:323380-396335 (-)
72955bp
Gene Type
gene
Gene Description (Protein Product)
tRNA-dihydrouridine(16 17) synthase NAD(P)( ) -like
Organism
Pseudotsuga menziesii
Also AS AT5G67220

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Regulatory gene
PSME_00335.g Aspartate glutamate uridylate kinase family protein
PSME_00767.g transcription factor
PSME_00870.g Aspartate glutamate uridylate kinase family protein

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0002943 tRNA dihydrouridine synthesis BP
GO:0003674 molecular_function MF
GO:0003824 catalytic activity MF
GO:0006139 nucleobase-containing compound metabolic process BP
GO:0006396 RNA processing BP
GO:0006399 tRNA metabolic process BP
GO:0006400 tRNA modification BP
GO:0006725 cellular aromatic compound metabolic process BP
GO:0006807 nitrogen compound metabolic process BP
GO:0008033 tRNA processing BP
GO:0008150 biological_process BP
GO:0008152 metabolic process BP
GO:0009451 RNA modification BP
GO:0009987 cellular process BP
GO:0010467 gene expression BP
GO:0016070 RNA metabolic process BP
GO:0016491 oxidoreductase activity MF
GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors MF
GO:0017150 tRNA dihydrouridine synthase activity MF
GO:0034470 ncRNA processing BP
GO:0034641 cellular nitrogen compound metabolic process BP
GO:0034660 ncRNA metabolic process BP
GO:0043170 macromolecule metabolic process BP
GO:0043412 macromolecule modification BP
GO:0044237 cellular metabolic process BP
GO:0044238 primary metabolic process BP
GO:0046483 heterocycle metabolic process BP
GO:0055114 obsolete oxidation-reduction process BP
GO:0071704 organic substance metabolic process BP
GO:0090304 nucleic acid metabolic process BP
GO:0140098 catalytic activity, acting on RNA MF
GO:0140101 catalytic activity, acting on a tRNA MF
GO:1901360 organic cyclic compound metabolic process BP