Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
gene-LOC103926744
View in Genome Browser
Position
NW_025999612.1:8899989-8907240 (-)
7251bp
Gene Type
gene
Gene Description (Protein Product)
lysine-specific demethylase
Organism
Pyrus x bretschneideri
Also AS MD06G1159300AT3G48430

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
gene-LOC103946743 PHD-finger
gene-LOC103946584 Polycomb group protein
gene-LOC103938338 Histone-lysine N-methyltransferase
Regulatory gene
gene-LOC103926593 Myb-related protein
gene-LOC103926634 SANT SWI3; ADA2; N-CoR and TFIIIB'' DNA-binding domains
gene-LOC103926939 Myb-related protein
Target gene
gene-LOC103926516 von Willebrand factor (vWF) type A domain
gene-LOC103926518 U11 U12 small nuclear ribonucleoprotein 48 kDa
gene-LOC103926521 -

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0000003 reproduction BP
GO:0000902 cell morphogenesis BP
GO:0003006 developmental process involved in reproduction BP
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005634 nucleus CC
GO:0006325 chromatin organization BP
GO:0006464 protein modification process BP
GO:0006482 protein demethylation BP
GO:0006807 nitrogen compound metabolic process BP
GO:0006996 organelle organization BP
GO:0007275 multicellular organism development BP
GO:0008150 biological_process BP
GO:0008152 metabolic process BP
GO:0008214 protein dealkylation BP
GO:0009653 anatomical structure morphogenesis BP
GO:0009719 response to endogenous stimulus BP
GO:0009725 response to hormone BP
GO:0009741 response to brassinosteroid BP
GO:0009791 post-embryonic development BP
GO:0009826 unidimensional cell growth BP
GO:0009892 negative regulation of metabolic process BP
GO:0009987 cellular process BP
GO:0010033 response to organic substance BP
GO:0010228 vegetative to reproductive phase transition of meristem BP
GO:0010605 negative regulation of macromolecule metabolic process BP
GO:0010639 negative regulation of organelle organization BP
GO:0014070 response to organic cyclic compound BP
GO:0016043 cellular component organization BP
GO:0016049 cell growth BP
GO:0016569 obsolete covalent chromatin modification BP
GO:0016570 histone modification BP
GO:0016577 histone demethylation BP
GO:0019222 regulation of metabolic process BP
GO:0019538 protein metabolic process BP
GO:0022414 reproductive process BP
GO:0031056 regulation of histone modification BP
GO:0031057 negative regulation of histone modification BP
GO:0031323 regulation of cellular metabolic process BP
GO:0031324 negative regulation of cellular metabolic process BP
GO:0031399 regulation of protein modification process BP
GO:0031400 negative regulation of protein modification process BP
GO:0032268 regulation of protein metabolic process BP
GO:0032269 negative regulation of protein metabolic process BP
GO:0032501 multicellular organismal process BP
GO:0032502 developmental process BP
GO:0032989 cellular component morphogenesis BP
GO:0033043 regulation of organelle organization BP
GO:0033044 regulation of chromosome organization BP
GO:0033169 histone H3-K9 demethylation BP
GO:0033993 response to lipid BP
GO:0035065 regulation of histone acetylation BP
GO:0035067 negative regulation of histone acetylation BP
GO:0036211 protein modification process BP
GO:0040007 growth BP
GO:0042221 response to chemical BP
GO:0043170 macromolecule metabolic process BP
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0043412 macromolecule modification BP
GO:0044237 cellular metabolic process BP
GO:0044238 primary metabolic process BP
GO:0044260 cellular macromolecule metabolic process BP
GO:0044267 protein metabolic process BP
GO:0044424 obsolete intracellular part CC
GO:0044464 obsolete cell part CC
GO:0048366 leaf development BP
GO:0048367 shoot system development BP
GO:0048519 negative regulation of biological process BP
GO:0048523 negative regulation of cellular process BP
GO:0048589 developmental growth BP
GO:0048608 reproductive structure development BP
GO:0048731 system development BP
GO:0048827 phyllome development BP
GO:0048856 anatomical structure development BP
GO:0048869 cellular developmental process BP
GO:0050789 regulation of biological process BP
GO:0050794 regulation of cellular process BP
GO:0050896 response to stimulus BP
GO:0051128 regulation of cellular component organization BP
GO:0051129 negative regulation of cellular component organization BP
GO:0051171 regulation of nitrogen compound metabolic process BP
GO:0051172 negative regulation of nitrogen compound metabolic process BP
GO:0051246 regulation of protein metabolic process BP
GO:0051248 negative regulation of protein metabolic process BP
GO:0051276 chromosome organization BP
GO:0060255 regulation of macromolecule metabolic process BP
GO:0060560 developmental growth involved in morphogenesis BP
GO:0061458 reproductive system development BP
GO:0065007 biological regulation BP
GO:0070076 histone lysine demethylation BP
GO:0070988 demethylation BP
GO:0071704 organic substance metabolic process BP
GO:0071840 cellular component organization or biogenesis BP
GO:0080090 regulation of primary metabolic process BP
GO:0099402 plant organ development BP
GO:1901564 organonitrogen compound metabolic process BP
GO:1901700 response to oxygen-containing compound BP
GO:1901983 regulation of protein acetylation BP
GO:1901984 negative regulation of protein acetylation BP
GO:1902275 regulation of chromatin organization BP
GO:1905268 negative regulation of chromatin organization BP
GO:2000756 regulation of peptidyl-lysine acetylation BP
GO:2000757 negative regulation of peptidyl-lysine acetylation BP
GO:2001251 negative regulation of chromosome organization BP